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Flatiron Health (United States)

companyNew York, United States

Research output, citation impact, and the most-cited recent papers from Flatiron Health (United States) (United States). Aggregated across the NobleBlocks index of 300M+ scholarly works.

Total works
8.8K
Citations
502.8K
h-index
284
i10-index
5.6K
Also known as
Flatiron Health (United States)

Top-cited papers from Flatiron Health (United States)

Welcome to the Tidyverse
Hadley Wickham, Mara Averick, Jennifer Bryan, Winston Chang +4 more
2019· The Journal of Open Source Software21.9Kdoi:10.21105/joss.01686

RESUMENEvaluación del efecto de un curso nivelatorio de matemáticas en educación superior: el caso de Matemáticas Básicas La investigación evalúa los efectos de tomar un curso de nivelación obligatorio, que se ofrece una única vez (i.e.no puede repetirse) para estudiantes de pregrado, sobre la probabilidad de matricularse, el desempeño en las asignaturas universitarias de matemáticas, avance en la carrera y probabilidad de graduarse.La investigación emplea un diseño de regresión discontinua que aprovecha el hecho de que los estudiantes admitidos a la universidad que tengan en la prueba de ingreso un puntaje en matemáticas inferior a un umbral están obligados a tomar el curso de nivelación de matemáticas básicas.Se encuentra que el curso de nivelación no tiene un efecto en la probabilidad de matricularse, de desvincularse del programa ni de graduarse seis años después de haber sido admitido.Hay un efecto

The Astropy Project: Building an Open-science Project and Status of the v2.0 Core Package<sup>*</sup>
Adrian M. Price-Whelan, Brigitta Sipőcz, Hans Moritz Günther, Pey Lian Lim +4 more
2018· The Astronomical Journal7.4Kdoi:10.3847/1538-3881/aabc4f

Abstract The Astropy Project supports and fosters the development of open-source and openly developed Python packages that provide commonly needed functionality to the astronomical community. A key element of the Astropy Project is the core package astropy , which serves as the foundation for more specialized projects and packages. In this article, we provide an overview of the organization of the Astropy project and summarize key features in the core package, as of the recent major release, version 2.0. We then describe the project infrastructure designed to facilitate and support development for a broader ecosystem of interoperable packages. We conclude with a future outlook of planned new features and directions for the broader Astropy Project.

The Astropy Project: Sustaining and Growing a Community-oriented Open-source Project and the Latest Major Release (v5.0) of the Core Package
Adrian M. Price-Whelan, LIM, Pey Lian, A. Zonca, STARKMAN, Nathaniel +4 more
2022· Research Portal (Queen's University Belfast)4.7Kdoi:10.3847/1538-4357/ac7c74

Full list of authors: Price-Whelan, Adrian M.; Lim, Pey Lian; Earl, Nicholas; Starkman, Nathaniel; Bradley, Larry; Shupe, David L.; Patil, Aarya A.; Corrales, Lia; Brasseur, C. E.; Noethe, Maximilian; Donath, Axel; Tollerud, Erik; Morris, Brett M.; Ginsburg, Adam; Vaher, Eero; Weaver, Benjamin A.; Tocknell, James; Jamieson, William; van Kerkwijk, Marten H.; Robitaille, Thomas P.; Merry, Bruce; Bachetti, Matteo; Gunther, H. Moritz; Aldcroft, Thomas L.; Alvarado-Montes, Jaime A.; Archibald, Anne M.; Bodi, Attila; Bapat, Shreyas; Barentsen, Geert; Bazan, Juanjo; Biswas, Manish; Boquien, Mederic; Burke, D. J.; Cara, Daria; Cara, Mihai; Conroy, Kyle E.; Conseil, Simon; Craig, Matthew W.; Cross, Robert M.; Cruz, Kelle L.; D'Eugenio, Francesco; Dencheva, Nadia; Devillepoix, Hadrien A. R.; Dietrich, Jorg P.; Eigenbrot, Arthur Davis; Erben, Thomas; Ferreira, Leonardo; Foreman-Mackey, Daniel; Fox, Ryan; Freij, Nabil; Garg, Suyog; Geda, Robel; Glattly, Lauren; Gondhalekar, Yash; Gordon, Karl D.; Grant, David; Greenfield, Perry; Groener, Austen M.; Guest, Steve; Gurovich, Sebastian; Handberg, Rasmus; Hart, Akeem; Hatfield-Dodds, Zac; Homeier, Derek; Hosseinzadeh, Griffin; Jenness, Tim; Jones, Craig K.; Joseph, Prajwel; Kalmbach, J. Bryce; Karamehmetoglu, Emir; Kaluszynski, Mikolaj; Kelley, Michael S. P.; Kern, Nicholas; Kerzendorf, Wolfgang E.; Koch, Eric W.; Kulumani, Shankar; Lee, Antony; Ly, Chun; Ma, Zhiyuan; MacBride, Conor; Maljaars, Jakob M.; Muna, Demitri; Murphy, N. A.; Norman, Henrik; O'Steen, Richard; Oman, Kyle A.; Pacifici, Camilla; Pascual, Sergio; Pascual-Granado, J.; Patil, Rohit R.; Perren, Gabriel, I; Pickering, Timothy E.; Rastogi, Tanuj; Roulston, Benjamin R.; Ryan, Daniel F.; Rykoff, Eli S.; Sabater, Jose; Sakurikar, Parikshit; Salgado, Jesus; Sanghi, Aniket; Saunders, Nicholas; Savchenko, Volodymyr; Schwardt, Ludwig; Seifert-Eckert, Michael; Shih, Albert Y.; Jain, Anany Shrey; Shukla, Gyanendra; Sick, Jonathan; Simpson, Chris; Singanamalla, Sudheesh; Singer, Leo P.; Singhal, Jaladh; Sinha, Manodeep; Sipocz, Brigitta M.; Spitler, Lee R.; Stansby, David; Streicher, Ole; Sumak, Jani; Swinbank, John D.; Taranu, Dan S.; Tewary, Nikita; Tremblay, Grant R.; De Val-Borro, Miguel; Vasovic, Zlatan; Van Kooten, Samuel J.; Verma, Shresth; Cardoso, Jose Vinicius de Miranda; Williams, Peter K. G.; Wilson, Tom J.; Winkel, Benjamin; Wood-Vasey, W. M.; Xue, Rui; Yoachim, Peter; Zhang, Chen; Zonca, Andrea; Astropy Project Contributors; TARDIS Collaboration; Astropy Coordination Comm.--This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

Machine learning and the physical sciences
Giuseppe Carleo, J. I. Cirac, K. Cranmer, Laurent Daudet +4 more
2019· Reviews of Modern Physics2.5Kdoi:10.1103/revmodphys.91.045002

In October 2018 an APS Physics Next Workshop on Machine Learning was held in Riverhead, NY. This article reviews and summarizes the proceedings of this very broad, emerging field.This needs to be a placard in the left-hand column, with a custom tag.

GWTC-2: Compact Binary Coalescences Observed by LIGO and Virgo during the First Half of the Third Observing Run
R. Abbott, T. D. Abbott, S. Abraham, F. Acernese +4 more
2021· Physical Review X2.0Kdoi:10.1103/physrevx.11.021053

We report on gravitational-wave discoveries from compact binary coalescences detected by Advanced LIGO and Advanced Virgo in the first half of the third observing run (O3a) between 1 April 2019 <a:math xmlns:a="http://www.w3.org/1998/Math/MathML" display="inline"><a:mrow><a:mn>15</a:mn><a:mo>∶</a:mo><a:mn>00</a:mn></a:mrow></a:math> UTC and 1 October 2019 <c:math xmlns:c="http://www.w3.org/1998/Math/MathML" display="inline"><c:mrow><c:mn>15</c:mn><c:mo>∶</c:mo><c:mn>00</c:mn></c:mrow></c:math> UTC. By imposing a false-alarm-rate threshold of two per year in each of the four search pipelines that constitute our search, we present 39 candidate gravitational-wave events. At this threshold, we expect a contamination fraction of less than 10%. Of these, 26 candidate events were reported previously in near-real time through gamma-ray coordinates network notices and circulars; 13 are reported here for the first time. The catalog contains events whose sources are black hole binary mergers up to a redshift of approximately 0.8, as well as events whose components cannot be unambiguously identified as black holes or neutron stars. For the latter group, we are unable to determine the nature based on estimates of the component masses and spins from gravitational-wave data alone. The range of candidate event masses which are unambiguously identified as binary black holes (both objects <e:math xmlns:e="http://www.w3.org/1998/Math/MathML" display="inline"><e:mo>≥</e:mo><e:mn>3</e:mn><e:mtext> </e:mtext><e:mtext> </e:mtext><e:msub><e:mi>M</e:mi><e:mo stretchy="false">⊙</e:mo></e:msub></e:math>) is increased compared to GWTC-1, with total masses from approximately <h:math xmlns:h="http://www.w3.org/1998/Math/MathML" display="inline"><h:mn>14</h:mn><h:mtext> </h:mtext><h:mtext> </h:mtext><h:msub><h:mi>M</h:mi><h:mo stretchy="false">⊙</h:mo></h:msub></h:math> for GW190924_021846 to approximately <k:math xmlns:k="http://www.w3.org/1998/Math/MathML" display="inline"><k:mn>150</k:mn><k:mtext> </k:mtext><k:mtext> </k:mtext><k:msub><k:mi>M</k:mi><k:mo stretchy="false">⊙</k:mo></k:msub></k:math> for GW190521. For the first time, this catalog includes binary systems with significantly asymmetric mass ratios, which had not been observed in data taken before April 2019. We also find that 11 of the 39 events detected since April 2019 have positive effective inspiral spins under our default prior (at 90% credibility), while none exhibit negative effective inspiral spin. Given the increased sensitivity of Advanced LIGO and Advanced Virgo, the detection of 39 candidate events in approximately 26 weeks of data (approximately 1.5 per week) is consistent with GWTC-1. Published by the American Physical Society 2021

Simulating galaxy formation with the IllustrisTNG model
Annalisa Pillepich, Volker Springel, Dylan Nelson, Shy Genel +4 more
2017· Monthly Notices of the Royal Astronomical Society2.0Kdoi:10.1093/mnras/stx2656

We introduce an updated physical model to simulate the formation and evolution of galaxies in cosmological, large-scale gravity+magnetohydrodynamical simulations with the moving mesh code AREPO. The overall framework builds upon the successes of the Illustris galaxy formation model, and includes prescriptions for star formation, stellar evolution, chemical enrichment, primordial and metal-line cooling of the gas, stellar feedback with galactic outflows, and black hole formation, growth and multimode feedback. In this paper, we give a comprehensive description of the physical and numerical advances that form the core of the IllustrisTNG (The Next Generation) framework. We focus on the revised implementation of the galactic winds, of which we modify the directionality, velocity, thermal content and energy scalings, and explore its effects on the galaxy population. As described in earlier works, the model also includes a new black-hole-driven kinetic feedback at low accretion rates, magnetohydrodynamics and improvements to the numerical scheme. Using a suite of (25 Mpc h&lt;SUP&gt;-1&lt;/SUP&gt;)&lt;SUP&gt;3&lt;/SUP&gt; cosmological boxes, we assess the outcome of the new model at our fiducial resolution. The presence of a self- consistently amplified magnetic field is shown to have an important impact on the stellar content of 10&lt;SUP&gt;12&lt;/SUP&gt; M&lt;SUB&gt;☉&lt;/SUB&gt; haloes and above. Finally, we demonstrate that the new galactic winds promise to solve key problems identified in Illustris in matching observational constraints and affecting the stellar content and sizes of the low-mass end of the galaxy population.

First Sagittarius A* Event Horizon Telescope Results. I. The Shadow of the Supermassive Black Hole in the Center of the Milky Way
Kazunori Akiyama, A. Alberdi, W. Alef, Juan Carlos Algaba +4 more
2022· The Astrophysical Journal Letters1.8Kdoi:10.3847/2041-8213/ac6674

Abstract We present the first Event Horizon Telescope (EHT) observations of Sagittarius A* (Sgr A*), the Galactic center source associated with a supermassive black hole. These observations were conducted in 2017 using a global interferometric array of eight telescopes operating at a wavelength of λ = 1.3 mm. The EHT data resolve a compact emission region with intrahour variability. A variety of imaging and modeling analyses all support an image that is dominated by a bright, thick ring with a diameter of 51.8 ± 2.3 μ as (68% credible interval). The ring has modest azimuthal brightness asymmetry and a comparatively dim interior. Using a large suite of numerical simulations, we demonstrate that the EHT images of Sgr A* are consistent with the expected appearance of a Kerr black hole with mass ∼4 × 10 6 M ⊙ , which is inferred to exist at this location based on previous infrared observations of individual stellar orbits, as well as maser proper-motion studies. Our model comparisons disfavor scenarios where the black hole is viewed at high inclination ( i &gt; 50°), as well as nonspinning black holes and those with retrograde accretion disks. Our results provide direct evidence for the presence of a supermassive black hole at the center of the Milky Way, and for the first time we connect the predictions from dynamical measurements of stellar orbits on scales of 10 3 –10 5 gravitational radii to event-horizon-scale images and variability. Furthermore, a comparison with the EHT results for the supermassive black hole M87* shows consistency with the predictions of general relativity spanning over three orders of magnitude in central mass.

First results from the IllustrisTNG simulations: matter and galaxy clustering
Volker Springel, Rüdiger Pakmor, Annalisa Pillepich, Rainer Weinberger +4 more
2017· Monthly Notices of the Royal Astronomical Society1.8Kdoi:10.1093/mnras/stx3304

Hydrodynamical simulations of galaxy formation have now reached sufficient volume to make precision predictions for clustering on cosmologically relevant scales. Here, we use our new IllustrisTNG simulations to study the non-linear correlation functions and power spectra of baryons, dark matter, galaxies, and haloes over an exceptionally large range of scales. We find that baryonic effects increase the clustering of dark matter on small scales and damp the total matter power spectrum on scales up to k ̃ 10 h Mpc&lt;SUP&gt;-1&lt;/SUP&gt; by 20 per cent. The non-linear two-point correlation function of the stellar mass is close to a power-law over a wide range of scales and approximately invariant in time from very high redshift to the present. The two-point correlation function of the simulated galaxies agrees well with Sloan Digital Sky Survey at its mean redshift z ≃ 0.1, both as a function of stellar mass and when split according to galaxy colour, apart from a mild excess in the clustering of red galaxies in the stellar mass range of10&lt;SUP&gt;9&lt;/SUP&gt;-10&lt;SUP&gt;10&lt;/SUP&gt; h&lt;SUP&gt;-2&lt;/SUP&gt; M&lt;SUB&gt;☉&lt;/SUB&gt;. Given this agreement, the TNG simulations can make valuable theoretical predictions for the clustering bias of different galaxy samples. We find that the clustering length of the galaxy autocorrelation function depends strongly on stellar mass and redshift. Its power-law slope γ is nearly invariant with stellar mass, but declines from γ ̃ 1.8 at redshift z = 0 to γ ̃ 1.6 at redshift z ̃ 1, beyond which the slope steepens again. We detect significant scale dependences in the bias of different observational tracers of large- scale structure, extending well into the range of the baryonic acoustic oscillations and causing nominal (yet fortunately correctable) shifts of the acoustic peaks of around ̃ 5 per cent.

GW190814: Gravitational Waves from the Coalescence of a 23 Solar Mass Black Hole with a 2.6 Solar Mass Compact Object
R. Abbott, T. D. Abbott, S. Abraham, F. Acernese +4 more
2020· The Astrophysical Journal Letters1.8Kdoi:10.3847/2041-8213/ab960f

Abstract We report the observation of a compact binary coalescence involving a 22.2–24.3 M ⊙ black hole and a compact object with a mass of 2.50–2.67 M ⊙ (all measurements quoted at the 90% credible level). The gravitational-wave signal, GW190814, was observed during LIGO’s and Virgo’s third observing run on 2019 August 14 at 21:10:39 UTC and has a signal-to-noise ratio of 25 in the three-detector network. The source was localized to 18.5 deg 2 at a distance of Mpc; no electromagnetic counterpart has been confirmed to date. The source has the most unequal mass ratio yet measured with gravitational waves, , and its secondary component is either the lightest black hole or the heaviest neutron star ever discovered in a double compact-object system. The dimensionless spin of the primary black hole is tightly constrained to ≤0.07. Tests of general relativity reveal no measurable deviations from the theory, and its prediction of higher-multipole emission is confirmed at high confidence. We estimate a merger rate density of 1–23 Gpc −3 yr −1 for the new class of binary coalescence sources that GW190814 represents. Astrophysical models predict that binaries with mass ratios similar to this event can form through several channels, but are unlikely to have formed in globular clusters. However, the combination of mass ratio, component masses, and the inferred merger rate for this event challenges all current models of the formation and mass distribution of compact-object binaries.

First results from the IllustrisTNG simulations: the stellar mass content of groups and clusters of galaxies
Annalisa Pillepich, Dylan Nelson, Lars Hernquist, Volker Springel +4 more
2017· Monthly Notices of the Royal Astronomical Society1.7Kdoi:10.1093/mnras/stx3112

The IllustrisTNG project is a new suite of cosmological magnetohydrodynamical simulations of galaxy formation performed with the arepo code and updated models for feedback physics. Here, we introduce the first two simulations of the series, TNG100 and TNG300, and quantify the stellar mass content of about 4000 massive galaxy groups and clusters (1013 ≤ M200c/M⊙ ≤ 1015) at recent times (z ≤ 1). The richest clusters have half of their total stellar mass bound to satellite galaxies, with the other half being associated with the central galaxy and the diffuse intracluster light. Haloes more massive than about 5 × 1014 M⊙ have more diffuse stellar mass outside 100 kpc than within 100 kpc, with power-law slopes of the radial mass density distribution as shallow as the dark matter's ( − 3.5 ≲ α3D ≲ −3). Total halo mass is a very good predictor of stellar mass, and vice versa: at z = 0, the 3D stellar mass measured within 30 kpc scales as ∝(M500c)0.49 with a ∼0.12 dex scatter. This is possibly too steep in comparison to the available observational constraints, even though the abundance of The Next Generation less-massive galaxies ( ≲ 1011 M⊙ in stars) is in good agreement with the measured galaxy stellar mass functions at recent epochs. The 3D sizes of massive galaxies fall too on a tight (∼0.16 dex scatter) power-law relation with halo mass, with rstars0.5∝(M200c)0.53⁠. Even more fundamentally, halo mass alone is a good predictor for the whole stellar mass profiles beyond the inner few kiloparsecs, and we show how on average these can be precisely recovered given a single-mass measurement of the galaxy or its halo.

The Simons Observatory: science goals and forecasts
P. A. R. Ade, James Aguirre, Zeeshan Ahmed, Simone Aiola +4 more
2019· Journal of Cosmology and Astroparticle Physics1.6Kdoi:10.1088/1475-7516/2019/02/056

The Simons Observatory (SO) is a new cosmic microwave background experiment being built on Cerro Toco in Chile, due to begin observations in the early 2020s. We describe the scientific goals of the experiment, motivate the design, and forecast its performance. SO will measure the temperature and polarization anisotropy of the cosmic microwave background in six frequency bands centered at: 27, 39, 93, 145, 225 and 280 GHz. The initial configuration of SO will have three small-aperture 0.5-m telescopes and one large-aperture 6-m telescope, with a total of 60,000 cryogenic bolometers. Our key science goals are to characterize the primordial perturbations, measure the number of relativistic species and the mass of neutrinos, test for deviations from a cosmological constant, improve our understanding of galaxy evolution, and constrain the duration of reionization. The small aperture telescopes will target the largest angular scales observable from Chile, mapping ≈ 10% of the sky to a white noise level of 2 μK-arcmin in combined 93 and 145 GHz bands, to measure the primordial tensor-to-scalar ratio, r , at a target level of σ( r )=0.003. The large aperture telescope will map ≈ 40% of the sky at arcminute angular resolution to an expected white noise level of 6 μK-arcmin in combined 93 and 145 GHz bands, overlapping with the majority of the Large Synoptic Survey Telescope sky region and partially with the Dark Energy Spectroscopic Instrument. With up to an order of magnitude lower polarization noise than maps from the Planck satellite, the high-resolution sky maps will constrain cosmological parameters derived from the damping tail, gravitational lensing of the microwave background, the primordial bispectrum, and the thermal and kinematic Sunyaev-Zel'dovich effects, and will aid in delensing the large-angle polarization signal to measure the tensor-to-scalar ratio. The survey will also provide a legacy catalog of 16,000 galaxy clusters and more than 20,000 extragalactic sources.

First results from the IllustrisTNG simulations: the galaxy colour bimodality
Dylan Nelson, Annalisa Pillepich, Volker Springel, Rainer Weinberger +4 more
2017· Monthly Notices of the Royal Astronomical Society1.5Kdoi:10.1093/mnras/stx3040

We introduce the first two simulations of the IllustrisTNG project, a next generation of cosmological magnetohydrodynamical simulations, focusing on the optical colours of galaxies. We explore TNG100, a rerun of the original Illustris box, and TNG300, which includes 2 × 2500&lt;SUP&gt;3&lt;/SUP&gt; resolution elements in a volume 20 times larger. Here, we present first results on the galaxy colour bimodality at low redshift. Accounting for the attenuation of stellar light by dust, we compare the simulated (g - r) colours of 10&lt;SUP&gt;9&lt;/SUP&gt; &amp;lt; M&lt;SUB&gt;⋆&lt;/SUB&gt;/M&lt;SUB&gt;☉&lt;/SUB&gt; &amp;lt; 10&lt;SUP&gt;12.5&lt;/SUP&gt; galaxies to the observed distribution from the Sloan Digital Sky Survey. We find a striking improvement with respect to the original Illustris simulation, as well as excellent quantitative agreement with the observations, with a sharp transition in median colour from blue to red at a characteristic M&lt;SUB&gt;⋆&lt;/SUB&gt; ̃ 10&lt;SUP&gt;10.5&lt;/SUP&gt; M&lt;SUB&gt;☉&lt;/SUB&gt;. Investigating the build-up of the colour-mass plane and the formation of the red sequence, we demonstrate that the primary driver of galaxy colour transition is supermassive black hole feedback in its low accretion state. Across the entire population the median colour transition time-scale ∆t&lt;SUB&gt;green&lt;/SUB&gt; is ̃1.6 Gyr, a value which drops for increasingly massive galaxies. We find signatures of the physical process of quenching: at fixed stellar mass, redder galaxies have lower star formation rates, gas fractions, and gas metallicities; their stellar populations are also older and their large-scale interstellar magnetic fields weaker than in bluer galaxies. Finally, we measure the amount of stellar mass growth on the red sequence. Galaxies with M&lt;SUB&gt;⋆&lt;/SUB&gt; &amp;gt; 10&lt;SUP&gt;11&lt;/SUP&gt; M&lt;SUB&gt;☉&lt;/SUB&gt; which redden at z &amp;lt; 1 accumulate on average ̃25 per cent of their final z = 0 mass post-reddening; at the same time, ̃18 per cent of such massive galaxies acquire half or more of their final stellar mass while on the red sequence.

Rank-Normalization, Folding, and Localization: An Improved Rˆ for Assessing Convergence of MCMC (with Discussion)
Aki Vehtari, Andrew Gelman, Daniel Simpson, Bob Carpenter +1 more
2020· Bayesian Analysis1.5Kdoi:10.1214/20-ba1221

Markov chain Monte Carlo is a key computational tool in Bayesian statistics, but it can be challenging to monitor the convergence of an iterative stochastic algorithm. In this paper we show that the convergence diagnostic Rˆ of Gelman and Rubin (1992) has serious flaws. Traditional Rˆ will fail to correctly diagnose convergence failures when the chain has a heavy tail or when the variance varies across the chains. In this paper we propose an alternative rank-based diagnostic that fixes these problems. We also introduce a collection of quantile-based local efficiency measures, along with a practical approach for computing Monte Carlo error estimates for quantiles. We suggest that common trace plots should be replaced with rank plots from multiple chains. Finally, we give recommendations for how these methods should be used in practice.

The NANOGrav 15 yr Data Set: Evidence for a Gravitational-wave Background
Gabriella Agazie, Akash Anumarlapudi, Anne M. Archibald, Zaven Arzoumanian +4 more
2023· The Astrophysical Journal Letters1.5Kdoi:10.3847/2041-8213/acdac6

Abstract We report multiple lines of evidence for a stochastic signal that is correlated among 67 pulsars from the 15 yr pulsar timing data set collected by the North American Nanohertz Observatory for Gravitational Waves. The correlations follow the Hellings–Downs pattern expected for a stochastic gravitational-wave background. The presence of such a gravitational-wave background with a power-law spectrum is favored over a model with only independent pulsar noises with a Bayes factor in excess of 10 14 , and this same model is favored over an uncorrelated common power-law spectrum model with Bayes factors of 200–1000, depending on spectral modeling choices. We have built a statistical background distribution for the latter Bayes factors using a method that removes interpulsar correlations from our data set, finding p = 10 −3 (≈3 σ ) for the observed Bayes factors in the null no-correlation scenario. A frequentist test statistic built directly as a weighted sum of interpulsar correlations yields p = 5 × 10 −5 to 1.9 × 10 −4 (≈3.5 σ –4 σ ). Assuming a fiducial f −2/3 characteristic strain spectrum, as appropriate for an ensemble of binary supermassive black hole inspirals, the strain amplitude is <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" overflow="scroll"> <mml:msubsup> <mml:mrow> <mml:mn>2.4</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>−</mml:mo> <mml:mn>0.6</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>+</mml:mo> <mml:mn>0.7</mml:mn> </mml:mrow> </mml:msubsup> <mml:mo>×</mml:mo> <mml:msup> <mml:mrow> <mml:mn>10</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>−</mml:mo> <mml:mn>15</mml:mn> </mml:mrow> </mml:msup> </mml:math> (median + 90% credible interval) at a reference frequency of 1 yr −1 . The inferred gravitational-wave background amplitude and spectrum are consistent with astrophysical expectations for a signal from a population of supermassive black hole binaries, although more exotic cosmological and astrophysical sources cannot be excluded. The observation of Hellings–Downs correlations points to the gravitational-wave origin of this signal.

The IllustrisTNG simulations: public data release
Dylan Nelson, Volker Springel, Annalisa Pillepich, Vicente Rodríguez-Gómez +4 more
2019· Computational Astrophysics and Cosmology1.4Kdoi:10.1186/s40668-019-0028-x

Abstract We present the full public release of all data from the TNG100 and TNG300 simulations of the IllustrisTNG project. IllustrisTNG is a suite of large volume, cosmological, gravo-magnetohydrodynamical simulations run with the moving-mesh code Arepo . TNG includes a comprehensive model for galaxy formation physics, and each TNG simulation self-consistently solves for the coupled evolution of dark matter, cosmic gas, luminous stars, and supermassive black holes from early time to the present day, $z=0$ <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML"> <mml:mi>z</mml:mi> <mml:mo>=</mml:mo> <mml:mn>0</mml:mn> </mml:math> . Each of the flagship runs—TNG50, TNG100, and TNG300—are accompanied by halo/subhalo catalogs, merger trees, lower-resolution and dark-matter only counterparts, all available with 100 snapshots. We discuss scientific and numerical cautions and caveats relevant when using TNG. The data volume now directly accessible online is ∼750 TB, including 1200 full volume snapshots and ∼80,000 high time-resolution subbox snapshots. This will increase to ∼1.1 PB with the future release of TNG50. Data access and analysis examples are available in IDL, Python, and Matlab. We describe improvements and new functionality in the web-based API, including on-demand visualization and analysis of galaxies and halos, exploratory plotting of scaling relations and other relationships between galactic and halo properties, and a new JupyterLab interface. This provides an online, browser-based, near-native data analysis platform enabling user computation with local access to TNG data, alleviating the need to download large datasets.

The 16th Data Release of the Sloan Digital Sky Surveys: First Release from the APOGEE-2 Southern Survey and Full Release of eBOSS Spectra
Romina Ahumada, Carlos Allende Prieto, Andrés Almeida, F. Anders +4 more
2020· The Astrophysical Journal Supplement Series1.4Kdoi:10.3847/1538-4365/ab929e

Abstract This paper documents the 16th data release (DR16) from the Sloan Digital Sky Surveys (SDSS), the fourth and penultimate from the fourth phase (SDSS-IV). This is the first release of data from the Southern Hemisphere survey of the Apache Point Observatory Galactic Evolution Experiment 2 (APOGEE-2); new data from APOGEE-2 North are also included. DR16 is also notable as the final data release for the main cosmological program of the Extended Baryon Oscillation Spectroscopic Survey (eBOSS), and all raw and reduced spectra from that project are released here. DR16 also includes all the data from the Time Domain Spectroscopic Survey and new data from the SPectroscopic IDentification of ERosita Survey programs, both of which were co-observed on eBOSS plates. DR16 has no new data from the Mapping Nearby Galaxies at Apache Point Observatory (MaNGA) survey (or the MaNGA Stellar Library “MaStar”). We also preview future SDSS-V operations (due to start in 2020), and summarize plans for the final SDSS-IV data release (DR17).

GW190521: A Binary Black Hole Merger with a Total Mass of <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline"><mml:mrow><mml:mn>150</mml:mn><mml:mtext> </mml:mtext><mml:mtext> </mml:mtext><mml:msub><mml:mrow><mml:mi>M</mml:mi></mml:mrow><mml:mrow><mml:mo stretchy="false">⊙</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math>
R. Abbott, T. D. Abbott, S. Abraham, F. Acernese +4 more
2020· Physical Review Letters1.3Kdoi:10.1103/physrevlett.125.101102

On May 21, 2019 at 03:02:29 UTC Advanced LIGO and Advanced Virgo observed a short duration gravitational-wave signal, GW190521, with a three-detector network signal-to-noise ratio of 14.7, and an estimated false-alarm rate of 1 in 4900 yr using a search sensitive to generic transients. If GW190521 is from a quasicircular binary inspiral, then the detected signal is consistent with the merger of two black holes with masses of 85_{-14}^{+21} M_{⊙} and 66_{-18}^{+17} M_{⊙} (90% credible intervals). We infer that the primary black hole mass lies within the gap produced by (pulsational) pair-instability supernova processes, with only a 0.32% probability of being below 65 M_{⊙}. We calculate the mass of the remnant to be 142_{-16}^{+28} M_{⊙}, which can be considered an intermediate mass black hole (IMBH). The luminosity distance of the source is 5.3_{-2.6}^{+2.4} Gpc, corresponding to a redshift of 0.82_{-0.34}^{+0.28}. The inferred rate of mergers similar to GW190521 is 0.13_{-0.11}^{+0.30} Gpc^{-3} yr^{-1}.

High-definition spatial transcriptomics for in situ tissue profiling
Sanja Vicković, Gökçen Eraslan, Fredrik Salmén, Johanna Klughammer +4 more
2019· Nature Methods1.2Kdoi:10.1038/s41592-019-0548-y

Spatial and molecular characteristics determine tissue function, yet high-resolution methods to capture both concurrently are lacking. Here, we developed high-definition spatial transcriptomics, which captures RNA from histological tissue sections on a dense, spatially barcoded bead array. Each experiment recovers several hundred thousand transcript-coupled spatial barcodes at 2-μm resolution, as demonstrated in mouse brain and primary breast cancer. This opens the way to high-resolution spatial analysis of cells and tissues. A dense, spatially barcoded bead array captures RNA from histological tissue sections for spatially resolved gene expression analysis.

Recent developments in the P<scp>y</scp>SCF program package
Qiming Sun, Xing Zhang, Samragni Banerjee, Peng Bao +4 more
2020· The Journal of Chemical Physics1.2Kdoi:10.1063/5.0006074

PySCF is a Python-based general-purpose electronic structure platform that supports first-principles simulations of molecules and solids as well as accelerates the development of new methodology and complex computational workflows. This paper explains the design and philosophy behind PySCF that enables it to meet these twin objectives. With several case studies, we show how users can easily implement their own methods using PySCF as a development environment. We then summarize the capabilities of PySCF for molecular and solid-state simulations. Finally, we describe the growing ecosystem of projects that use PySCF across the domains of quantum chemistry, materials science, machine learning, and quantum information science.

Search for an Isotropic Gravitational-wave Background with the Parkes Pulsar Timing Array
Daniel J. Reardon, Andrew Zic, R. M. Shannon, G. Hobbs +4 more
2023· The Astrophysical Journal Letters1.2Kdoi:10.3847/2041-8213/acdd02

Abstract Pulsar timing arrays aim to detect nanohertz-frequency gravitational waves (GWs). A background of GWs modulates pulsar arrival times and manifests as a stochastic process, common to all pulsars, with a signature spatial correlation. Here we describe a search for an isotropic stochastic gravitational-wave background (GWB) using observations of 30 millisecond pulsars from the third data release of the Parkes Pulsar Timing Array (PPTA), which spans 18 yr. Using current Bayesian inference techniques we recover and characterize a common-spectrum noise process. Represented as a strain spectrum <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" overflow="scroll"> <mml:msub> <mml:mrow> <mml:mi>h</mml:mi> </mml:mrow> <mml:mrow> <mml:mi>c</mml:mi> </mml:mrow> </mml:msub> <mml:mo>=</mml:mo> <mml:mi>A</mml:mi> <mml:msup> <mml:mrow> <mml:mo stretchy="false">(</mml:mo> <mml:mi>f</mml:mi> <mml:mrow> <mml:mo stretchy="true">/</mml:mo> </mml:mrow> <mml:mn>1</mml:mn> <mml:msup> <mml:mrow> <mml:mi>yr</mml:mi> </mml:mrow> <mml:mrow> <mml:mo>−</mml:mo> <mml:mn>1</mml:mn> </mml:mrow> </mml:msup> <mml:mo stretchy="false">)</mml:mo> </mml:mrow> <mml:mrow> <mml:mi>α</mml:mi> </mml:mrow> </mml:msup> </mml:math> , we measure <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" overflow="scroll"> <mml:mi>A</mml:mi> <mml:mo>=</mml:mo> <mml:msubsup> <mml:mrow> <mml:mn>3.1</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>−</mml:mo> <mml:mn>0.9</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>+</mml:mo> <mml:mn>1.3</mml:mn> </mml:mrow> </mml:msubsup> <mml:mo>×</mml:mo> <mml:msup> <mml:mrow> <mml:mn>10</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>−</mml:mo> <mml:mn>15</mml:mn> </mml:mrow> </mml:msup> </mml:math> and α = −0.45 ± 0.20, respectively (median and 68% credible interval). For a spectral index of α = −2/3, corresponding to an isotropic background of GWs radiated by inspiraling supermassive black hole binaries, we recover an amplitude of <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" overflow="scroll"> <mml:mi>A</mml:mi> <mml:mo>=</mml:mo> <mml:msubsup> <mml:mrow> <mml:mn>2.04</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>−</mml:mo> <mml:mn>0.22</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>+</mml:mo> <mml:mn>0.25</mml:mn> </mml:mrow> </mml:msubsup> <mml:mo>×</mml:mo> <mml:msup> <mml:mrow> <mml:mn>10</mml:mn> </mml:mrow> <mml:mrow> <mml:mo>−</mml:mo> <mml:mn>15</mml:mn> </mml:mrow> </mml:msup> </mml:math> . However, we demonstrate that the apparent signal strength is time-dependent, as the first half of our data set can be used to place an upper limit on A that is in tension with the inferred common-spectrum amplitude using the complete data set. We search for spatial correlations in the observations by hierarchically analyzing individual pulsar pairs, which also allows for significance validation through randomizing pulsar positions on the sky. For a process with α = −2/3, we measure spatial correlations consistent with a GWB, with an estimated false-alarm probability of p ≲ 0.02 (approx. 2 σ ). The long timing baselines of the PPTA and the access to southern pulsars will continue to play an important role in the International Pulsar Timing Array.