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Institut National de la Recherche Scientifique

UniversityQuébec, Quebec, Canada

Research output, citation impact, and the most-cited recent papers from Institut National de la Recherche Scientifique (Canada). Aggregated across the NobleBlocks index of 300M+ scholarly works.

Total works
25.7K
Citations
2.0M
h-index
446
i10-index
29.8K
Also known as
Institut National de la Recherche ScientifiqueNational Institute of Scientific Research

Top-cited papers from Institut National de la Recherche Scientifique

Comparison of parametric representations for monosyllabic word recognition in continuously spoken sentences
S. Davis, P. Mermelstein
1980· IEEE Transactions on Acoustics Speech and Signal Processing5.3Kdoi:10.1109/tassp.1980.1163420

Several parametric representations of the acoustic signal were compared with regard to word recognition performance in a syllable-oriented continuous speech recognition system. The vocabulary included many phonetically similar monosyllabic words, therefore the emphasis was on the ability to retain phonetically significant acoustic information in the face of syntactic and duration variations. For each parameter set (based on a mel-frequency cepstrum, a linear frequency cepstrum, a linear prediction cepstrum, a linear prediction spectrum, or a set of reflection coefficients), word templates were generated using an efficient dynamic warping method, and test data were time registered with the templates. A set of ten mel-frequency cepstrum coefficients computed every 6.4 ms resulted in the best performance, namely 96.5 percent and 95.0 percent recognition with each of two speakers. The superior performance of the mel-frequency cepstrum coefficients may be attributed to the fact that they better represent the perceptually relevant aspects of the short-term speech spectrum.

The Mixed Methods Appraisal Tool (MMAT) version 2018 for information professionals and researchers
Quan Nha Hong, Sergi Fàbregues, Gillian Bartlett, Felicity Boardman +4 more
2018· Education for Information4.3Kdoi:10.3233/efi-180221

INTRODUCTION: Appraising the quality of studies included in systematic reviews combining qualitative and quantitative evidence is challenging. To address this challenge, a critical appraisal tool was developed: the Mixed Methods Appraisal Tool (MMAT). The aim of this paper is to present the enhance ments made to the MMAT. DEVELOPMENT: The MMAT was initially developed in 2006 based on a literature review on systematic reviews combining qualitative and quantitative evidence. It was subject to pilot and interrater reliability testing. A revised version of the MMAT was developed in 2018 based on the results from usefulness testing, a literature review on critical appraisal tools and a modified e-Delphi study with methodological experts to identify core criteria. TOOL DESCRIPTION: The MMAT assesses the quality of qualitative, quantitative, and mixed methods studies. It focuses on methodological criteria and includes five core quality criteria for each of the following five categories of study designs: (a) qualitative, (b) randomized controlled, (c) nonrandomized, (d) quantitative descriptive, and (e) mixed methods. CONCLUSION: The MMAT is a unique tool that can be used to appraise the quality of different study designs. Also, by limiting to core criteria, the MMAT can provide a more efficient appraisal.

Guidelines for the use and interpretation of assays for monitoring autophagy
Daniel J. Klionsky, Fábio Camargo Abdalla, Hagai Abeliovich, Robert T. Abraham +4 more
2012· Autophagy4.1Kdoi:10.4161/auto.19496

In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.

Recent Advances in Electrocatalysts for Oxygen Reduction Reaction
Minhua Shao, Qiaowan Chang, Jean‐Pol Dodelet, Régis Chenitz
2016· Chemical Reviews3.9Kdoi:10.1021/acs.chemrev.5b00462

The recent advances in electrocatalysis for oxygen reduction reaction (ORR) for proton exchange membrane fuel cells (PEMFCs) are thoroughly reviewed. This comprehensive Review focuses on the low- and non-platinum electrocatalysts including advanced platinum alloys, core-shell structures, palladium-based catalysts, metal oxides and chalcogenides, carbon-based non-noble metal catalysts, and metal-free catalysts. The recent development of ORR electrocatalysts with novel structures and compositions is highlighted. The understandings of the correlation between the activity and the shape, size, composition, and synthesis method are summarized. For the carbon-based materials, their performance and stability in fuel cells and comparisons with those of platinum are documented. The research directions as well as perspectives on the further development of more active and less expensive electrocatalysts are provided.

Iron-Based Catalysts with Improved Oxygen Reduction Activity in Polymer Electrolyte Fuel Cells
Michel Lefèvre, Eric Proietti, Frédéric Jaouen, Jean‐Pol Dodelet
2009· Science3.1Kdoi:10.1126/science.1170051

Iron-based catalysts for the oxygen-reduction reaction in polymer electrolyte membrane fuel cells have been poorly competitive with platinum catalysts, in part because they have a comparatively low number of active sites per unit volume. We produced microporous carbon-supported iron-based catalysts with active sites believed to contain iron cations coordinated by pyridinic nitrogen functionalities in the interstices of graphitic sheets within the micropores. We found that the greatest increase in site density was obtained when a mixture of carbon support, phenanthroline, and ferrous acetate was ball-milled and then pyrolyzed twice, first in argon, then in ammonia. The current density of a cathode made with the best iron-based electrocatalyst reported here can equal that of a platinum-based cathode with a loading of 0.4 milligram of platinum per square centimeter at a cell voltage of >/=0.9 volt.

Observation of<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline"><mml:mi mathvariant="script">P</mml:mi><mml:mi mathvariant="script">T</mml:mi></mml:math>-Symmetry Breaking in Complex Optical Potentials
A. R. Guo, Gregory J. Salamo, D. Duchesne, Roberto Morandotti +4 more
2009· Physical Review Letters2.8Kdoi:10.1103/physrevlett.103.093902

In 1998, Bender and Boettcher found that a wide class of Hamiltonians, even though non-Hermitian, can still exhibit entirely real spectra provided that they obey parity-time requirements or PT symmetry. Here we demonstrate experimentally passive PT-symmetry breaking within the realm of optics. This phase transition leads to a loss induced optical transparency in specially designed pseudo-Hermitian guiding potentials.

Lakes and reservoirs as regulators of carbon cycling and climate
Lars J. Tranvik, John Downing, James B. Cotner, Steven Loiselle +4 more
2009· Limnology and Oceanography2.8Kdoi:10.4319/lo.2009.54.6_part_2.2298

We explore the role of lakes in carbon cycling and global climate, examine the mechanisms influencing carbon pools and transformations in lakes, and discuss how the metabolism of carbon in the inland waters is likely to change in response to climate. Furthermore, we project changes as global climate change in the abundance and spatial distribution of lakes in the biosphere, and we revise the estimate for the global extent of carbon transformation in inland waters. This synthesis demonstrates that the global annual emissions of carbon dioxide from inland waters to the atmosphere are similar in magnitude to the carbon dioxide uptake by the oceans and that the global burial of organic carbon in inland water sediments exceeds organic carbon sequestration on the ocean floor. The role of inland waters in global carbon cycling and climate forcing may be changed by human activities, including construction of impoundments, which accumulate large amounts of carbon in sediments and emit large amounts of methane to the atmosphere. Methane emissions are also expected from lakes on melting permafrost. The synthesis presented here indicates that (1) inland waters constitute a significant component of the global carbon cycle, (2) their contribution to this cycle has significantly changed as a result of human activities, and (3) they will continue to change in response to future climate change causing decreased as well as increased abundance of lakes as well as increases in the number of aquatic impoundments.

Macrophage Cytokines: Involvement in Immunity and Infectious Diseases
Guillermo Arango Duque, Albert Descoteaux
2014· Frontiers in Immunology2.7Kdoi:10.3389/fimmu.2014.00491

The evolution of macrophages has made them primordial for both development and immunity. Their functions range from the shaping of body plans to the ingestion and elimination of apoptotic cells and pathogens. Cytokines are small soluble proteins that confer instructions and mediate communication among immune and non-immune cells. A portfolio of cytokines is central to the role of macrophages as sentries of the innate immune system that mediate the transition from innate to adaptive immunity. In concert with other mediators, cytokines bias the fate of macrophages into a spectrum of inflammation-promoting "classically activated," to anti-inflammatory or "alternatively activated" macrophages. Deregulated cytokine secretion is implicated in several disease states ranging from chronic inflammation to allergy. Macrophages release cytokines via a series of beautifully orchestrated pathways that are spatiotemporally regulated. At the molecular level, these exocytic cytokine secretion pathways are coordinated by multi-protein complexes that guide cytokines from their point of synthesis to their ports of exit into the extracellular milieu. These trafficking proteins, many of which were discovered in yeast and commemorated in the 2013 Nobel Prize in Physiology or Medicine, coordinate the organelle fusion steps that are responsible for cytokine release. This review discusses the functions of cytokines secreted by macrophages, and summarizes what is known about their release mechanisms. This information will be used to delve into how selected pathogens subvert cytokine release for their own survival.

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)<sup>1</sup>
Daniel J. Klionsky, Amal Kamal Abdel‐Aziz, Sara Abdelfatah, Mahmoud Abdellatif +4 more
2021· Autophagy2.7Kdoi:10.1080/15548627.2020.1797280

autophagic responses. Here, we critically discuss current methods of assessing autophagy and the information they can, or cannot, provide. Our ultimate goal is to encourage intellectual and technical innovation in the field.

Tetrathiafulvalenes, Oligoacenenes, and Their Buckminsterfullerene Derivatives:  The Brick and Mortar of Organic Electronics
Michael Bendikov, Fred Wudl, Dmitrii F. Perepichka
2004· Chemical Reviews1.7Kdoi:10.1021/cr030666m

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTTetrathiafulvalenes, Oligoacenenes, and Their Buckminsterfullerene Derivatives: The Brick and Mortar of Organic ElectronicsMichael Bendikov, Fred Wudl, and Dmitrii F. PerepichkaView Author Information Department of Chemistry and Biochemistry and Exotic Materials Institute, University of California, Los Angeles, California 90095 Centre Énergie, Matériaux et Télécommunications, Institut National de la Recherche Scientifique, 1650 Blvd. Lionel-Boulet, Varennes, Québec J3X 1S2, Canada Cite this: Chem. Rev. 2004, 104, 11, 4891–4946Publication Date (Web):October 26, 2004Publication History Received17 May 2004Published online26 October 2004Published inissue 1 November 2004https://pubs.acs.org/doi/10.1021/cr030666mhttps://doi.org/10.1021/cr030666mresearch-articleACS PublicationsCopyright © 2004 American Chemical SocietyRequest reuse permissionsArticle Views15471Altmetric-Citations1575LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose SUBJECTS:Aromatic compounds,Hydrocarbons,Molecules,Reaction products,Redox reactions Get e-Alerts

THE CHEMICAL CYCLE AND BIOACCUMULATION OF MERCURY
François M. M. Morel, Anne M. L. Kraepiel, Marc Amyot
1998· Annual Review of Ecology and Systematics1.6Kdoi:10.1146/annurev.ecolsys.29.1.543

▪ Abstract Because it is very toxic and accumulates in organisms, particularly in fish, mercury is an important pollutant and one of the most studied. Nonetheless we still have an incomplete understanding of the factors that control the bioconcentration of mercury. Elemental mercury is efficiently transported as a gas around the globe, and even remote areas show evidence of mercury pollution originating from industrial sources such as power plants. Besides elemental mercury, the major forms of mercury in water are ionic mercury (which is bound to chloride, sulfide, or organic acids) and organic mercury, particularly methylmercury. Methylmercury rather than inorganic mercury is bioconcentrated because it is better retained by organisms at various levels in the food chain. The key factor determining the concentration of mercury in the biota is the methylmercury concentration in water, which is controlled by the relative efficiency of the methylation and demethylation processes. Anoxic waters and sediments are an important source of methylmercury, apparently as the result of the methylating activity of sulfate-reducing bacteria. In surface waters, methylmercury may originate from anoxic layers or be formed through poorly known biological or chemical processes. Demethylation is effected both photochemically and biologically.

Everything You Always Wanted to Know about Copula Modeling but Were Afraid to Ask
Christian Genest, Anne‐Catherine Favre
2007· Journal of Hydrologic Engineering1.6Kdoi:10.1061/(asce)1084-0699(2007)12:4(347)

This paper presents an introduction to inference for copula models, based on rank methods. By working out in detail a small, fictitious numerical example, the writers exhibit the various steps involved in investigating the dependence between two random variables and in modeling it using copulas. Simple graphical tools and numerical techniques are presented for selecting an appropriate model, estimating its parameters, and checking its goodness-of-fit. A larger, realistic application of the methodology to hydrological data is then presented.

Recent advances in non-precious metal catalysis for oxygen-reduction reaction in polymer electrolyte fuelcells
Frédéric Jaouen, Eric Proietti, Michel Lefèvre, Régis Chenitz +4 more
2010· Energy & Environmental Science1.6Kdoi:10.1039/c0ee00011f

Hydrogen produced from water and renewable energy could fuel a large fleet of proton-exchange-fuel-cell vehicles in the future. However, the dependence on expensive Pt-based electrocatalysts in such fuel cells remains a major obstacle for a widespread deployment of this technology. One solution to overcome this predicament is to reduce the Pt content by a factor of ten by replacing the Pt-based catalysts with non-precious metal catalysts at the oxygen-reducing cathode. Fe- and Co-based electrocatalysts for this reaction have been studied for over 50 years, but they were insufficiently active for the high efficiency and power density needed for transportation fuel cells. Recently, several breakthroughs occurred that have increased the activity and durability of non-precious metal catalysts (NPMCs), which can now be regarded as potential competitors to Pt-based catalysts. This review focuses on the new synthesis methods that have led to these breakthroughs. A modeling analysis is also conducted to analyze the improvements required from NPMC-based cathodes to match the performance of Pt-based cathodes, even at high current density. While no further breakthrough in volume-specific activity of NPMCs is required, incremental improvements of the volume-specific activity and effective protonic conductivity within the fuel-cell cathode are necessary. Regarding durability, NPMCs with the best combination of durability and activity result in ca. 3 times lower fuel cell performance than the most active NPMCs at 0.80 V. Thus, major tasks will be to combine durability with higher activity, and also improve durability at cell voltages greater than 0.60 V.

Luminescence nanothermometry
Daniel Jaque, Fiorenzo Vetrone
2012· Nanoscale1.5Kdoi:10.1039/c2nr30764b

The current status of luminescence nanothermometry is reviewed in detail. Based on the main parameters of luminescence including intensity, bandwidth, bandshape, polarization, spectral shift and lifetime, we initially describe and compare the different classes of luminescence nanothermometry. Subsequently, the various luminescent materials used in each case are discussed and the mechanisms at the root of the luminescence thermal sensitivity are described. The most important results obtained in each case are summarized and the advantages and disadvantages of these approaches are discussed.

Modified TiO<sub>2</sub> For Environmental Photocatalytic Applications: A Review
Rimeh Daghrir, Patrick Drogui, Didier Robert
2013· Industrial & Engineering Chemistry Research1.5Kdoi:10.1021/ie303468t

This paper summarizes recent research dealing with development of titanium dioxide (TiO2) used for environmental applications. TiO2 plays the most important role owing to its excellent chemical and physical properties. However, the TiO2 band edge lies in the UV region that makes them inactive under visible irradiation. In this regard, considerable efforts have been made to increase the visible light activity of TiO2 via the modification of its electronic and optical properties. Doping TiO2 using either anions or cations is one of the typical approaches that has been largely applied. Coupling TiO2 with a narrow bad gap semiconductor (MxOy/TiO2 or MxSy/TiO2) represents another approach. This work aims to encompass the new progress of TiO2 for an efficient application in water and wastewater treatment under visible light, emphasizes the future trends of TiO2 in the environment, and suggests new research directions, including preparation aspects for the development of this promising material.

Femtosecond Structural Dynamics in<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline"><mml:mrow><mml:msub><mml:mrow><mml:mi>VO</mml:mi></mml:mrow><mml:mrow><mml:mn>2</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:math>during an Ultrafast Solid-Solid Phase Transition
A. Cavalleri, Csaba Tóth, C. W. Siders, Jeffrey A. Squier +3 more
2001· Physical Review Letters1.3Kdoi:10.1103/physrevlett.87.237401

Femtosecond x-ray and visible pulses were used to probe structural and electronic dynamics during an optically driven, solid-solid phase transition in VO(2). For high interband electronic excitation (approximately 5 x 10(21) cm(-3)), a subpicosecond transformation into the high-T, rutile phase of the material is observed, simultaneous with an insulator-to-metal transition. The fast time scale observed suggests that, in this regime, the structural transition may not be thermally initiated.

Solid-Solution Partitioning of Metals in Contaminated Soils:  Dependence on pH, Total Metal Burden, and Organic Matter
Sébastien Sauvé, William H. Hendershot, Herbert E. Allen
2000· Environmental Science & Technology1.1Kdoi:10.1021/es9907764

Environmental risk assessment of metals depends to a great extent on modeling the fate and the mobility of metals based on soil−liquid partitioning coefficients. A large variability is observed among the reported values that could be used to predict metal mobility and bioavailability. To evaluate this, soil−liquid partitioning coefficients ( K d ) for many elements but especially for the metals cadmium, copper, lead, nickel, and zinc were compiled from over 70 studies of various origins collected from the literature. The relationships between the reported values are explored relative to variations in soil solution pH, soil organic matter (SOM), and concentrations of total soil metal. The results of multiple linear regressions show that K d values are best predicted using empirical linear regressions with pH (with R 2 values of 0.29−0.58) or with pH and either the log of SOM or the log of total metal and with resulting R 2 values of 0.42−0.76. A semi-mechanistic model based on the competitive adsorption of metal and H + [dependent on solution pH, total metal content, and log(SOM)] was a better tool to predict dissolved metal concentrations (with R 2 values of 0.61−0.88), with the exception of Pb (at 0.35).

Pituitary Adenylate Cyclase-Activating Polypeptide and Its Receptors: From Structure to Functions
David Vaudry, Bruno J. Gonzalez, Magali Basille, Laurent Yon +2 more
2000· Pharmacological Reviews1.1Kdoi:10.1016/s0031-6997(24)01449-2

Pituitary adenylate cyclase-activating polypeptide (PACAP) is a 38-amino acid peptide that was first isolated from ovine hypothalamic extracts on the basis of its ability to stimulate cAMP formation in anterior pituitary cells. PACAP belongs to the vasoactive intestinal polypeptide (VIP)-glucagon-growth hormone releasing factor-secretin superfamily. The sequence of PACAP has been remarkably well conserved during the evolution from protochordate to mammals, suggesting that PACAP is involved in the regulation of important biological functions. PACAP is widely distributed in the brain and peripheral organs, notably in the endocrine pancreas, gonads, and respiratory and urogenital tracts. Characterization of the PACAP precursor has revealed the existence of a PACAP-related peptide whose activity remains unknown. Two types of PACAP binding sites have been characterized. Type I binding sites exhibit a high affinity for PACAP and a much lower affinity for VIP whereas type II binding sites have similar affinity for PACAP and VIP. Molecular cloning of PACAP receptors has shown the existence of three distinct receptor subtypes, the PACAP-specific PAC1 receptor, which is coupled to several transduction systems, and the two PACAP/VIP-indifferent VPAC1 and VPAC2 receptors, which are primarily coupled to adenylyl cyclase. PAC1 receptors are particularly abundant in the brain and pituitary and adrenal glands whereas VPAC receptors are expressed mainly in the lung, liver, and testis. The wide distribution of PACAP and PACAP receptors has led to an explosion of studies aimed at determining the pharmacological effects and biological functions of the peptide. This report reviews the current knowledge concerning the multiple actions of PACAP in the central nervous system and in various peripheral organs including the endocrine glands, the airways, and the cardiovascular and immune systems, as well as the different effects of PACAP on a number of tumor cell types.

Improving the content validity of the mixed methods appraisal tool: a modified e-Delphi study
Quan Nha Hong, Pierre Pluye, Sergi Fàbregues, Gillian Bartlett +4 more
2019· Journal of Clinical Epidemiology1.1Kdoi:10.1016/j.jclinepi.2019.03.008

OBJECTIVE: The mixed methods appraisal tool (MMAT) was developed for critically appraising different study designs. This study aimed to improve the content validity of three of the five categories of studies in the MMAT by identifying relevant methodological criteria for appraising the quality of qualitative, survey, and mixed methods studies. STUDY DESIGN AND SETTING: First, we performed a literature review to identify critical appraisal tools and extract methodological criteria. Second, we conducted a two-round modified e-Delphi technique. We asked three method-specific panels of experts to rate the relevance of each criterion on a five-point Likert scale. RESULTS: A total of 383 criteria were extracted from 18 critical appraisal tools and a literature review on the quality of mixed methods studies, and 60 were retained. In the first and second rounds of the e-Delphi, 73 and 56 experts participated, respectively. Consensus was reached for six qualitative criteria, eight survey criteria, and seven mixed methods criteria. These results led to modifications of eight of the 11 MMAT (version 2011) criteria. Specifically, we reformulated two criteria, replaced four, and removed two. Moreover, we added six new criteria. CONCLUSION: Results of this study led to improve the content validity of this tool, revise it, and propose a new version (MMAT version 2018).

Micro-combs: A novel generation of optical sources
Alessia Pasquazi, Marco Peccianti, Luca Razzari, David Moss +4 more
2017· Physics Reports1.1Kdoi:10.1016/j.physrep.2017.08.004

In this framework, the demonstration of planar high-Q resonators, compatible with silicon technology Indeed, it is well acknowledged by the electronics industry that future generations of computer processing chips will inevitably require an extremely high density of copper-based interconnections, significantly increasing the chip power dissipation to beyond practical levels On-chip optical networks, or optical interconnects, can offer high speed and low energy pertransferred-bit, and micro-resonators are widely seen as a key component to interface the electronic world with photonics.