Karlsruhe University of Applied Sciences

Insects are the most speciose group of animals, but the phylogenetic relationships of many major lineages remain unresolved. We inferred the phylogeny of insects from 1478 protein-coding genes. Phylogenomic analyses of nucleotide and amino acid sequences, with site-specific nucleotide or domain-specific amino acid substitution models, produced statistically robust and congruent results resolving previously controversial phylogenetic relations hips. We dated the origin of insects to the Early Ordovician [~479 million years ago (Ma)], of insect flight to the Early Devonian (~406 Ma), of major extant lineages to the Mississippian (~345 Ma), and the major diversification of holometabolous insects to the Early Cretaceous. Our phylogenomic study provides a comprehensive reliable scaffold for future comparative analyses of evolutionary innovations among insects.

Is there anything resembling a truly noncoordinating anion? Would it not be great to be able to prepare any crazy, beautiful, or simply useful cationic species that one has in mind, or has detected by mass spectroscopy? In condensed phases the target cation has to be partnered with a suitable counteranion. This is the moment when difficulties arise and many wonderful ideas end in the sink owing to coordination or decomposition of the anion. However, maybe these counteranion problems can be overcome by one of the new weakly coordinating anions (WCAs). Herein is an overview on the available candidates in the quest for the least coordinating anion and a summary of new applications, available starting materials, and general strategies to introduce a WCA into a system. Some of the unusual properties of WCA salts such as high solubility in low dielectric media, pseudo gas-phase conditions in condensed phases, and the stabilization of weakly bound and low-charged complexes are rationalized on thermodynamic grounds. Limits of the WCAs, that is, anion coordination and decomposition, are shown and a quantum chemical analysis of all types of WCAs is presented which allows the choice of a particular WCA to be based on quantitative data from a wide range of different anions.

Abstract Bilbao Crystallographic Server is a web site with crystallographic programs and databases available on-line. The programs give access to general information related to space groups (generators, general positions, Wyckoff positions, irreducible representations), group-subgroup or group-supergroup pairs of space groups, and/or results on specific crystal structures. The utility of the programs is illustrated by treating phase-transition problems related to structural pseudosymmetry. Keywords: Space GroupsGroup-subgroup RelationsRepresentations Of Space GroupsPseudosymmetry

Safe handling of dynamic highway and inner city scenarios with autonomous vehicles involves the problem of generating traffic-adapted trajectories. In order to account for the practical requirements of the holistic autonomous system, we propose a semi-reactive trajectory generation method, which can be tightly integrated into the behavioral layer. The method realizes long-term objectives such as velocity keeping, merging, following, stopping, in combination with a reactive collision avoidance by means of optimal-control strategies within the Frenét-Frame of the street. The capabilities of this approach are demonstrated in the simulation of a typical high-speed highway scenario.

In dynamic magnetic resonance imaging (MRI) studies, the motion kinetics or the contrast variability are often hard to predict, hampering an appropriate choice of the image update rate or the temporal resolution. A constant azimuthal profile spacing (111.246 degrees), based on the Golden Ratio, is investigated as optimal for image reconstruction from an arbitrary number of profiles in radial MRI. The profile order is evaluated and compared with a uniform profile distribution in terms of signal-to-noise ratio (SNR) and artifact level. The favorable characteristics of such a profile order are exemplified in two applications on healthy volunteers. First, an advanced sliding window reconstruction scheme is applied to dynamic cardiac imaging, with a reconstruction window that can be flexibly adjusted according to the extent of cardiac motion that is acceptable. Second, a contrast-enhancing k-space filter is presented that permits reconstructing an arbitrary number of images at arbitrary time points from one raw data set. The filter was utilized to depict the T1-relaxation in the brain after a single inversion prepulse. While a uniform profile distribution with a constant angle increment is optimal for a fixed and predetermined number of profiles, a profile distribution based on the Golden Ratio proved to be an appropriate solution for an arbitrary number of profiles.

Purified LiAlH4 reacts with fluorinated alcohols HORF to give LiAl(ORF)4 (RF=-CH(CF3)2, 2a; -C(CH3)(CF3)2, 2b; -C(CF3)3, 2c) in 77 to 90% yield. The crude lithium aluminates LiAl(ORF)4 react metathetically with AgF to give the silver aluminates AgAl(ORF)4 (RF=-CH(CF3)2, 3a; -C(CH3)(CF3)2, 3b; -C(CF3)3, 3c) in almost quantitative yield. The solid-state structures of solvated 3a-c showed that the silver cation is only weakly coordinated (CN(Ag)=6-10; CN = coordination number) by the solvent and/or weak cation - anion contacts Ag-X (X=O, F, Cl, C). The strength of the Ag-X contacts of 3a-c was analysed by Brown's bond-valence method and then compared with other silver salts of weakly coordinating anions (WCAs), for example [CB11H6Cl6]- and [M(OTeF5)n]- (M=B, Sb, n=4, 6). Based on this quantitative picture we showed that the Al[OC(CF3)3]4 anion is one of the most weakly coordinating anions known. Moreover, the AgAl(ORF)4 species are certainly the easiest WCAs to access preparatively (20 g in two days), additionally at low cost. The Al-O bond length of Al(ORF)4- is shortest in the sterically congested Al[OC(CF3)3]4- anion-which is stable in H2O and aqueous HNO3 (35 weight%)--and indicates a strong and highly polar Al-O bond that is resistant towards heterolytic alkoxide ion abstraction. This observation was supported by a series of HF-DFT calculations of OR-, Al(OR)3 and Al(OR)4- at the MPW1PW91 and B3LYP levels (R= CH3, CF3, C(CF3)3). The alkoxide ion affinity (AIA) is highest for R=CF3 (AlA=384 +/- 9 kJ x mol(-1)) and R= C(CF3)3 (AIA=390 +/- 3 kJ x mol(-1)), but lowest for R=CH3 (AIA=363 +/- 7 kJ X mol(-1)). The gaseous AL(ORF)4-anions are stable against the action of the strong Lewis acid ALF3(g) by 88.5 +/- 2.5 (RF=CF3) and 63 +/- 12 kJ X mol(-1) (RF=C(CF3)3), while AL(OCH3)4- decomposes with -91 +/- 2 kJ X mol(-1). Therefore the presented fluorinated aluminates AL(ORF)4- appear to be ideal candidates when large and resistant WCAs are needed, for example, in cationic homogenous catalysis, for highly electrophilic cations or for weak cationic Lewis acid/base complexes.

The cellular basis of age-related tissue deterioration remains largely obscure. The ability to activate compensatory mechanisms in response to environmental stress is an important factor for survival and maintenance of cellular functions. Autophagy is activated both under short and prolonged stress and is required to clear the cell of dysfunctional organelles and altered proteins. We report that specific autophagy inhibition in muscle has a major impact on neuromuscular synaptic function and, consequently, on muscle strength, ultimately affecting the lifespan of animals. Inhibition of autophagy also exacerbates aging phenotypes in muscle, such as mitochondrial dysfunction, oxidative stress, and profound weakness. Mitochondrial dysfunction and oxidative stress directly affect acto-myosin interaction and force generation but show a limited effect on stability of neuromuscular synapses. These results demonstrate that age-related deterioration of synaptic structure and function is exacerbated by defective autophagy.

Molecular phylogeny increasingly supports the understanding of organismal relationships and provides the basis for the classification of microorganisms according to their natural affiliations. Comparative sequence analysis of ribosomal RNAs or the corresponding genes currently is the most widely used approach for the reconstruction of microbial phylogeny. The highly and less conserved primary and higher order structure elements of rRNAs document the history of microbial evolution and are informative for definite phylogenetic levels. An optimal alignment of the primary structures and a careful data selection are prerequisites for reliable phylogenetic conclusions. rRNA based phylogenetic trees can be reconstructed and the significance of their topologies evaluated by applying distance, maximum parsimony and maximum likelihood methods of phylogeny inference in comparison, and by fortuitous or directed resampling of the data set. Phylogenetic trees based on almost equivalent data sets of bacterial 23S and 16S rRNAs are in good agreement and their overall topologies are supported by alternative phylogenetic markers such as elongation factors and ATPase subunits. Besides their phylogenetic information content, the differently conserved primary structure regions of rRNAs provide target sites for specific hybridization probes which have been proven to be powerful tools for the identification of microbes on the basis of their phylogenetic relationships.

Abstract Da die Granulatform gegenüber Gütern in staubförmigem Zustand viele Vorteile hat, werden Ausgangsstoffe, Hilfsstoffe und Fertigstoffe zunehmend in Granulatform verarbeitet. Im ersten Teil der Arbeit werden die wichtigsten Eigenschaften der Granulate unter herstelltechnischen und anwendungstechnischen Gesichtspunkten besprochen. Der Begriff Granulieren umfaßt zwei physikalisch verschiedene Herstellverfahren, die Zerkleinerung und die Kornvergrößerung. Im zweiten Teil der Arbeit werden die physikalischen Grundlagen der Kornvergrößerung behandelt, wobei versucht wird, die Festigkeit der Granulate in Abhängigkeit von den verschiedenen Einflußgrößen qualitative und quantitativ abzuleiten. Der dritte Teil der Arbeit ist schließlich den technischen Granulatierverfahren gewidmet, wobei sowohl die Kornvergrößerungs‐ als auch die Zerkleinerungsverfahren beschrieben werden.

A general formulation of phase-field models for nonisothermal solidification in multicomponent and multiphase alloy systems is derived from an entropy functional in a thermodynamically consistent way. General expressions for the free energy densities, for multicomponent diffusion coefficients, and for both weak and faceted types of surface energy and kinetic anisotropy are possible. A three-dimensional simulator is developed to show the capability of the model to describe phase transitions, complex microstructure formation, and grain growth in polycrystalline textures.

The reaction of [Cp*Fe(eta5-P5)] with Cu(I)Cl in solvent mixtures of CH2Cl2/CH3CN leads to the formation of entirely inorganic fullerene-like molecules of the formula [[Cp*Fe(eta5:eta1:eta1:eta1:eta1:eta1-P5)]12[CuCl]10[Cu2Cl3]5[Cu(CH3CN)2]5] (1) possessing 90 inorganic core atoms. This compound represents a structural motif similar to that of C60: cyclo-P5 rings of [Cp*Fe(eta5-P5)] molecules are surrounded by six-membered P4Cu2 rings that result from the coordination of each of the phosphorus lone pairs to CuCl metal centers, which are further coordinated by P atoms of other cyclo-P5 rings. Thus, five- and six-membered rings alternate in a manner comparable to that observed in the fullerene molecules. The so-formed half shells are joined by [Cu2Cl3]- as well as by [Cu(CH3CN)2]+ units. The spherical body has an inside diameter of 1.25 nanometers and an outside diameter of 2.13 nanometers, which is about three times as large as that of C60.

Neutron scattering is used to characterize the magnetism of the vortices for the optimally doped high-temperature superconductor La(2-x)Sr(x)CuO4 (x = 0.163) in an applied magnetic field. As temperature is reduced, low-frequency spin fluctuations first disappear with the loss of vortex mobility, but then reappear. We find that the vortex state can be regarded as an inhomogeneous mixture of a superconducting spin fluid and a material containing a nearly ordered antiferromagnet. These experiments show that as for many other properties of cuprate superconductors, the important underlying microscopic forces are magnetic.

The fungal pathogen Ustilago maydis establishes a biotrophic relationship with its host plant maize (Zea mays). Hallmarks of the disease are large plant tumours in which fungal proliferation occurs. Previous studies suggested that classical defence pathways are not activated. Confocal microscopy, global expression profiling and metabolic profiling now shows that U. maydis is recognized early and triggers defence responses. Many of these early response genes are downregulated at later time points, whereas several genes associated with suppression of cell death are induced. The interplay between fungus and host involves changes in hormone signalling, induction of antioxidant and secondary metabolism, as well as the prevention of source leaf establishment. Our data provide novel insights into the complexity of a biotrophic interaction.

The electric conductivity can potentially be used as an additional diagnostic parameter, e.g., in tumor diagnosis. Moreover, the electric conductivity, in connection with the electric field, can be used to estimate the local SAR distribution during MR measurements. In this study, a new approach, called electric properties tomography (EPT) is presented. It derives the patient's electric conductivity, along with the corresponding electric fields, from the spatial sensitivity distributions of the applied RF coils, which are measured via MRI. Corresponding numerical simulations and initial experiments on a standard clinical MRI system underline the principal feasibility of EPT to determine the electric conductivity and the local SAR. In contrast to previous methods to measure the patient's electric properties, EPT does not apply externally mounted electrodes, currents, or RF probes, thus enhancing the practicality of the approach. Furthermore, in contrast to previous methods, EPT circumvents the solution of an inverse problem, which might lead to significantly higher spatial image resolution.

In the present contribution we propose a so-called solid-shell concept which incorporates only displacement degrees of freedom. Thus, some major disadvantages of the usually used degenerated shell concept are overcome. These disadvantages are related to boundary conditions—the handling of soft and hard support, the need for special co-ordinate systems at boundaries, the connection with continuum elements—and, in geometrically non-linear analyses, to a complicated update of the rotation vector. First, the kinematics of the so-called solid-shell concept in analogy to the degenerated shell concept are introduced. Then several modifications of the solid-shell concept are proposed to obtain locking-free solid-shell elements, leading also to formulations which allow the use of general three-dimensional material laws and which are also able to represent the normal stresses and strains in thickness direction. Numerical analyses of geometrically linear and non-linear problems are finally performed using solely assumed natural shear strain elements with a linear approximation in in-plane direction. Although some considerations are needed to get comparable boundary conditions in the examples analysed, the solid-shell elements prove to work as good as the degenerated shell elements. The numerical examples show that neither thickness nor shear locking are present even for distorted element shapes. © 1998 John Wiley & Sons, Ltd.

Shape-persistent macrocycles with an interior in the nanometer regime allow the attachment of (functional) side groups at defined positions at the ring. These side groups can have either a fixed orientation relative to the molecular backbone or they can adapt their orientation according to an external stimulus. The properties and applications of the compounds depend strongly on the orientation of these side groups. Macrocycles with intraannular or adaptable long alkyl groups display a new design principle for discotic liquid crystals. Macrocycles with extraannular (oligo)alkyl groups can be used for surface patterning in the nanometer regime and rings with extraannular oligostyryl groups are able to aggregate to supramolecular hollow polymer brushes.

Some of the most effective recent methods for content-based image classification work by quantizing image descriptors, and accumulating histograms of the resulting visual word codes. Large numbers of descriptors and large codebooks are required for good results and this becomes slow using k-means. We introduce Extremely Randomized Clustering Forests ensembles of randomly created clustering trees and show that they provide more accurate results, much faster training and testing, and good resistance to background clutter. Second, an efficient image classification method is proposed. It combines ERC-Forests and saliency maps very closely with the extraction of image information. For a given image, a classifier builds a saliency map online and uses it to classify the image. We show in several state-of-the-art image classification tasks that this method can speed up the classification process enormously. Finally, we show that the proposed ERC-Forests can also be used very successfully for learning distance between images. The distance computation algorithm consists of learning the characteristic differences between local descriptors sampled from pairs of same or different objects. These differences are vector quantized by ERC-Forests and the similarity measure is computed from this quantization. The similarity measure has been evaluated on four very different datasets and always outperforms the state-of-the-art competitive approaches.

Abstract We examine the reversible addition fragmentation chain transfer (RAFT) process with regard to its potential and limits in future industrial applications (including those conducted on a larger scale) as well as materials science. The outlook for the RAFT process is bright: Its unrivaled inherent process simplicity coupled with a wide tolerance to monomer classes and functionalities makes it a prime candidate for the use in large reactors. At the same time, it allows for ready access to complex macromolecular architectures of variable shape and size. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 5715–5723, 2008

Controlled actuation of soft objects with functional surfaces in aqueous environments presents opportunities for liquid phase electronics, novel assembled super-structures and unusual mechanical properties. We show the extraordinary electrochemically induced actuation of liquid metal droplets coated with nanoparticles, so-called "liquid metal marbles". We demonstrate that nanoparticle coatings of these marbles offer an extra dimension for affecting the bipolar electrochemically induced actuation. The nanoparticles can readily migrate along the surface of liquid metals, upon the application of electric fields, altering the capacitive behaviour and surface tension in a highly asymmetric fashion. Surprising actuation behaviours are observed illustrating that nanoparticle coatings can have a strong effect on the movement of these marbles. This significant novel phenomenon, combined with unique properties of liquid metal marbles, represents an exciting platform for enabling diverse applications that cannot be achieved using rigid metal beads.

High expression of EpCAM and the tetraspanin CO-029 has been associated with colorectal cancer progression. However, opposing results have been reported on CD44 variant isoform v6 (CD44v6) expression. We recently noted in rat gastrointestinal tumors that EpCAM, claudin-7, CO-029, and CD44v6 were frequently coexpressed and could form a complex. This finding suggested the possibly that the complex, rather than the individual molecules, could support tumor progression. The expression of EpCAM, claudin-7, CO-029, and CD44v6 expression was evaluated in colorectal cancer (n = 104), liver metastasis (n = 66), and tumor-free colon and liver tissue. Coexpression and complex formation of the molecules was correlated with clinical variables and apoptosis resistance. EpCAM, claudin-7, CO-029, and CD44v6 expression was up-regulated in colon cancer and liver metastasis. Expression of the four molecules did not correlate with tumor staging and grading. However, coexpression inversely correlated with disease-free survival. Coexpression was accompanied by complex formation and recruitment into tetraspanin-enriched membrane microdomains (TEM). Claudin-7 contributes to complex formation inasmuch as in the absence of claudin-7, EpCAM hardly associates with CO-029 and CD44v6 and is not recruited into TEMs. Notably, colorectal cancer lines that expressed the EpCAM/claudin-7/CO-029/CD44v6 complex displayed a higher degree of apoptosis resistance than lines devoid of any one of the four molecules. Expression of EpCAM, claudin-7, CO-029, and CD44v6 by themselves cannot be considered as prognostic markers in colorectal cancer. However, claudin-7-associated EpCAM is recruited into TEM and forms a complex with CO-029 and CD44v6 that facilitates metastasis formation.