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Rikkyo University

UniversityTokyo, Japan

Research output, citation impact, and the most-cited recent papers from Rikkyo University (Japan). Aggregated across the NobleBlocks index of 300M+ scholarly works.

Total works
10.0K
Citations
391.0K
h-index
220
i10-index
7.0K
Also known as
Rikkyo UniversityRikkyō daigakuSaint Paul's Universit立教大学

Top-cited papers from Rikkyo University

Photochromism of Diarylethene Molecules and Crystals: Memories, Switches, and Actuators
Masahiro Irie, Tuyoshi Fukaminato, Kenji Matsuda, Seiya Kobatake
2014· Chemical Reviews2.6Kdoi:10.1021/cr500249p

ADVERTISEMENT RETURN TO ISSUEPREVReviewNEXTPhotochromism of Diarylethene Molecules and Crystals: Memories, Switches, and ActuatorsMasahiro Irie*†, Tuyoshi Fukaminato‡, Kenji Matsuda§, and Seiya Kobatake∥View Author Information† Research Center for Smart Molecules, Rikkyo University, Nishi-Ikebukuro 3-34-1, Toshima-ku, Tokyo 171-8501, Japan‡ Research Institute for Electronic Science, Hokkaido University, N20, W10, Kita-ku, Sapporo 001-0020, Japan§ Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan∥ Department of Applied Chemistry, Graduate School of Engineering, Osaka City University, Sugimoto 3-3-138, Sumiyoshi-ku, Osaka 558-8585, Japan*E-mail: [email protected]Cite this: Chem. Rev. 2014, 114, 24, 12174–12277Publication Date (Web):December 16, 2014Publication History Received19 May 2014Published online16 December 2014Published inissue 24 December 2014https://pubs.acs.org/doi/10.1021/cr500249phttps://doi.org/10.1021/cr500249preview-articleACS PublicationsCopyright © 2014 American Chemical SocietyRequest reuse permissionsArticle Views43769Altmetric-Citations2136LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose SUBJECTS:Crystals,Electromagnetic radiation,Fluorescence,Irradiation,Molecular structure Get e-Alerts

How to factor-analyze your data right: do’s, don’ts, and how-to’s.
Masaki Matsunaga
2010· International journal of psychological research1.4Kdoi:10.21500/20112084.854

The current article provides a guideline for conducting factor analysis, a technique used to estimate the population-level factor structure underlying the given sample data. First, the distinction between exploratory and confirmatory factor analyses (EFA and CFA) is briefly discussed; along with this discussion, the notion of principal component analysis and why it does not provide a valid substitute of factor analysis is noted. Second, a step-by-step walk-through of conducting factor analysis is illustrated; through these walk-through instructions, various decisions that need to be made in factor analysis are discussed and recommendations provided. Specifically, suggestions for how to carry out preliminary procedures, EFA, and CFA are provided with SPSS and LISREL syntax examples. Finally, some critical issues concerning the appropriate (and not-so-appropriate) use of factor analysis are discussed along with the discussion of recommended practices.

<scp>Psi4</scp> 1.1: An Open-Source Electronic Structure Program Emphasizing Automation, Advanced Libraries, and Interoperability
Robert M. Parrish, Lori A. Burns, Daniel G. A. Smith, Andrew C. Simmonett +4 more
2017· Journal of Chemical Theory and Computation1.2Kdoi:10.1021/acs.jctc.7b00174

Psi4 is an ab initio electronic structure program providing methods such as Hartree-Fock, density functional theory, configuration interaction, and coupled-cluster theory. The 1.1 release represents a major update meant to automate complex tasks, such as geometry optimization using complete-basis-set extrapolation or focal-point methods. Conversion of the top-level code to a Python module means that Psi4 can now be used in complex workflows alongside other Python tools. Several new features have been added with the aid of libraries providing easy access to techniques such as density fitting, Cholesky decomposition, and Laplace denominators. The build system has been completely rewritten to simplify interoperability with independent, reusable software components for quantum chemistry. Finally, a wide range of new theoretical methods and analyses have been added to the code base, including functional-group and open-shell symmetry adapted perturbation theory, density-fitted coupled cluster with frozen natural orbitals, orbital-optimized perturbation and coupled-cluster methods (e.g., OO-MP2 and OO-LCCD), density-fitted multiconfigurational self-consistent field, density cumulant functional theory, algebraic-diagrammatic construction excited states, improvements to the geometry optimizer, and the "X2C" approach to relativistic corrections, among many other improvements.

Visualization of ATP levels inside single living cells with fluorescence resonance energy transfer-based genetically encoded indicators
Hiromi Imamura, Kim Phuong Huynh Nhat, Hiroko Togawa, Kenta Saito +4 more
2009· Proceedings of the National Academy of Sciences1.1Kdoi:10.1073/pnas.0904764106

Adenosine 5'-triphosphate (ATP) is the major energy currency of cells and is involved in many cellular processes. However, there is no method for real-time monitoring of ATP levels inside individual living cells. To visualize ATP levels, we generated a series of fluorescence resonance energy transfer (FRET)-based indicators for ATP that were composed of the epsilon subunit of the bacterial F(o)F(1)-ATP synthase sandwiched by the cyan- and yellow-fluorescent proteins. The indicators, named ATeams, had apparent dissociation constants for ATP ranging from 7.4 muM to 3.3 mM. By targeting ATeams to different subcellular compartments, we unexpectedly found that ATP levels in the mitochondrial matrix of HeLa cells are significantly lower than those of cytoplasm and nucleus. We also succeeded in measuring changes in the ATP level inside single HeLa cells after treatment with inhibitors of glycolysis and/or oxidative phosphorylation, revealing that glycolysis is the major ATP-generating pathway of the cells grown in glucose-rich medium. This was also confirmed by an experiment using oligomycin A, an inhibitor of F(o)F(1)-ATP synthase. In addition, it was demonstrated that HeLa cells change ATP-generating pathway in response to changes of nutrition in the environment.

X-Ray Imaging Spectrometer (XIS) on Board Suzaku
Katsuji Koyama, H. Tsunemi, Tadayasu Dotani, Mark W. Bautz +4 more
2007· Publications of the Astronomical Society of Japan1.1Kdoi:10.1093/pasj/59.sp1.s23

The XIS is an X-ray Imaging Spectrometer system, consisting of state-of-the-art charge-coupled devices (CCDs) optimized for X-ray detection, camera bodies, and control electronics. Four sets of XIS sensors are placed at the focal planes of the grazing-incidence, nested thin-foil mirrors (XRT: X-Ray Telescope) onboard the Suzaku satellite. Three of the XIS sensors have front-illuminated CCDs, while the other has a back-illuminated CCD. Coupled with the XRT, the energy range of 0.2–12 keV with energy resolution of 130 eV at 5.9 keV, and a field of view of $18^\prime \times 18^\prime$ are realized. Since the Suzaku launch on 2005 July 10, the XIS has been functioning well.

Genome evolution in the allotetraploid frog Xenopus laevis
Adam M. Session, Yoshinobu Uno, Taejoon Kwon, Jarrod Chapman +4 more
2016· Nature1.0Kdoi:10.1038/nature19840

Ancient polyploidization events have shaped diverse eukaryotic genomes 1 , including two rounds of whole-genome duplication at the base of the vertebrate radiation 2 . While polyploidy is rare in amniotes, presumably owing to constraints on sex chromosome dosage Polyploidy provides raw material for evolutionary diversification because gene duplicates To explore the origins and consequences of tetraploidy in the African clawed frog, we sequenced the Xenopus laevis genome and compared it to the related diploid X. tropicalis genome. We characterize the allotetraploid origin of X. laevis by partitioning its genome into two homoeologous subgenomes, marked by distinct families of 'fossil' transposable elements. On the basis of the activity of these elements and the age of hundreds of unitary pseudogenes, we estimate that the two diploid progenitor species diverged around 34 million years ago (Ma) and combined to form an allotetraploid around 17-18 Ma. More than 56% of all genes were retained in two homoeologous copies. Protein function, gene expression, and the amount of conserved flanking sequence all correlate with retention rates. The subgenomes have evolved asymmetrically, with one chromosome set more often preserving the ancestral state and the other experiencing more gene loss, deletion, rearrangement, and reduced gene expression.

The X-Ray Observatory Suzaku
Kazuhisa Mitsuda, Mark W. Bautz, Hajime Inoue, Richard L. Kelley +4 more
2007· Publications of the Astronomical Society of Japan1.0Kdoi:10.1093/pasj/59.sp1.s1

High-sensitivity wide-band X-ray spectroscopy is the key feature of the Suzaku X-ray observatory, launched on 2005 July 10. This paper summarizes the spacecraft, in-orbit performance, operations, and data processing that are related to observations. The scientific instruments, the high-throughput X-ray telescopes, X-ray CCD cameras, non-imaging hard X-ray detector are also described.

Primordial Black Hole Scenario for the Gravitational-Wave Event GW150914
Misao Sasaki, Teruaki Suyama, Takahiro Tanaka, Shuichiro Yokoyama
2016· Physical Review Letters942doi:10.1103/physrevlett.117.061101

We point out that the gravitational-wave event GW150914 observed by the LIGO detectors can be explained by the coalescence of primordial black holes (PBHs). It is found that the expected PBH merger rate would exceed the rate estimated by the LIGO Scientific Collaboration and the Virgo Collaboration if PBHs were the dominant component of dark matter, while it can be made compatible if PBHs constitute a fraction of dark matter. Intriguingly, the abundance of PBHs required to explain the suggested lower bound on the event rate, >2 events Gpc^{-3} yr^{-1}, roughly coincides with the existing upper limit set by the nondetection of the cosmic microwave background spectral distortion. This implies that the proposed PBH scenario may be tested in the not-too-distant future.

Population of Merging Compact Binaries Inferred Using Gravitational Waves through GWTC-3
R. Abbott, T. D. Abbott, F. Acernese, K. Ackley +4 more
2023· Physical Review X866doi:10.1103/physrevx.13.011048

We report on the population properties of compact binary mergers inferred from gravitational-wave observations of these systems during the first three LIGO-Virgo observing runs. The Gravitational-Wave Transient Catalog 3 (GWTC-3) contains signals consistent with three classes of binary mergers: binary black hole, binary neutron star, and neutron star–black hole mergers. We infer the binary neutron star merger rate to be between 10 and <a:math xmlns:a="http://www.w3.org/1998/Math/MathML" display="inline"><a:mrow><a:mn>1700</a:mn><a:mtext> </a:mtext><a:mtext> </a:mtext><a:msup><a:mrow><a:mi>Gpc</a:mi></a:mrow><a:mrow><a:mo>−</a:mo><a:mn>3</a:mn></a:mrow></a:msup><a:mtext> </a:mtext><a:msup><a:mrow><a:mi>yr</a:mi></a:mrow><a:mrow><a:mo>−</a:mo><a:mn>1</a:mn></a:mrow></a:msup></a:mrow></a:math> and the neutron star–black hole merger rate to be between 7.8 and <c:math xmlns:c="http://www.w3.org/1998/Math/MathML" display="inline"><c:mrow><c:mn>140</c:mn><c:mtext> </c:mtext><c:mtext> </c:mtext><c:msup><c:mrow><c:mi>Gpc</c:mi></c:mrow><c:mrow><c:mo>−</c:mo><c:mn>3</c:mn></c:mrow></c:msup><c:mtext> </c:mtext><c:msup><c:mrow><c:mi>yr</c:mi></c:mrow><c:mrow><c:mo>−</c:mo><c:mn>1</c:mn></c:mrow></c:msup></c:mrow></c:math>, assuming a constant rate density in the comoving frame and taking the union of 90% credible intervals for methods used in this work. We infer the binary black hole merger rate, allowing for evolution with redshift, to be between 17.9 and <e:math xmlns:e="http://www.w3.org/1998/Math/MathML" display="inline"><e:mrow><e:mn>44</e:mn><e:mtext> </e:mtext><e:mtext> </e:mtext><e:msup><e:mrow><e:mi>Gpc</e:mi></e:mrow><e:mrow><e:mo>−</e:mo><e:mn>3</e:mn></e:mrow></e:msup><e:mtext> </e:mtext><e:msup><e:mrow><e:mi>yr</e:mi></e:mrow><e:mrow><e:mo>−</e:mo><e:mn>1</e:mn></e:mrow></e:msup></e:mrow></e:math> at a fiducial redshift (<g:math xmlns:g="http://www.w3.org/1998/Math/MathML" display="inline"><g:mi>z</g:mi><g:mo>=</g:mo><g:mn>0.2</g:mn></g:math>). The rate of binary black hole mergers is observed to increase with redshift at a rate proportional to <i:math xmlns:i="http://www.w3.org/1998/Math/MathML" display="inline"><i:mo stretchy="false">(</i:mo><i:mn>1</i:mn><i:mo>+</i:mo><i:mi>z</i:mi><i:msup><i:mo stretchy="false">)</i:mo><i:mi>κ</i:mi></i:msup></i:math> with <m:math xmlns:m="http://www.w3.org/1998/Math/MathML" display="inline"><m:mi>κ</m:mi><m:mo>=</m:mo><m:mn>2.</m:mn><m:msubsup><m:mn>9</m:mn><m:mrow><m:mo>−</m:mo><m:mn>1.8</m:mn></m:mrow><m:mrow><m:mo>+</m:mo><m:mn>1.7</m:mn></m:mrow></m:msubsup></m:math> for <o:math xmlns:o="http://www.w3.org/1998/Math/MathML" display="inline"><o:mi>z</o:mi><o:mo>≲</o:mo><o:mn>1</o:mn></o:math>. Using both binary neutron star and neutron star–black hole binaries, we obtain a broad, relatively flat neutron star mass distribution extending from <q:math xmlns:q="http://www.w3.org/1998/Math/MathML" display="inline"><q:msubsup><q:mn>1.2</q:mn><q:mrow><q:mo>−</q:mo><q:mn>0.2</q:mn></q:mrow><q:mrow><q:mo>+</q:mo><q:mn>0.1</q:mn></q:mrow></q:msubsup></q:math> to <s:math xmlns:s="http://www.w3.org/1998/Math/MathML" display="inline"><s:msubsup><s:mn>2.0</s:mn><s:mrow><s:mo>−</s:mo><s:mn>0.3</s:mn></s:mrow><s:mrow><s:mo>+</s:mo><s:mn>0.3</s:mn></s:mrow></s:msubsup><s:msub><s:mi>M</s:mi><s:mo stretchy="false">⊙</s:mo></s:msub></s:math>. We confidently determine that the merger rate as a function of mass sharply declines after the expected maximum neutron star mass, but cannot yet confirm or rule out the existence of a lower mass gap between neutron stars and black holes. We also find the binary black hole mass distribution has localized over- and underdensities relative to a power-law distribution, with peaks emerging at chirp masses of <v:math xmlns:v="http://www.w3.org/1998/Math/MathML" display="inline"><v:msubsup><v:mn>8.3</v:mn><v:mrow><v:mo>−</v:mo><v:mn>0.5</v:mn></v:mrow><v:mrow><v:mo>+</v:mo><v:mn>0.3</v:mn></v:mrow></v:msubsup></v:math> and <x:math xmlns:x="http://www.w3.org/1998/Math/MathML" display="inline"><x:msubsup><x:mn>27.9</x:mn><x:mrow><x:mo>−</x:mo><x:mn>1.8</x:mn></x:mrow><x:mrow><x:mo>+</x:mo><x:mn>1.9</x:mn></x:mrow></x:msubsup><x:msub><x:mi>M</x:mi><x:mo stretchy="false">⊙</x:mo></x:msub></x:math>. While we continue to find that the mass distribution of a binary’s more massive component strongly decreases as a function of primary mass, we observe no evidence of a strongly suppressed merger rate above approximately <ab:math xmlns:ab="http://www.w3.org/1998/Math/MathML" display="inline"><ab:mn>60</ab:mn><ab:msub><ab:mi>M</ab:mi><ab:mo stretchy="false">⊙</ab:mo></ab:msub></ab:math>, which would indicate the presence of a upper mass gap. Observed black hole spins are small, with half of spin magnitudes below <db:math xmlns:db="http://www.w3.org/1998/Math/MathML" display="inline"><db:msub><db:mi>χ</db:mi><db:mi>i</db:mi></db:msub><db:mo>≈</db:mo><db:mn>0.25</db:mn></db:math>. While the majority of spins are preferentially aligned with the orbital angular momentum, we infer evidence of antialigned spins among the binary population. We observe an increase in spin magnitude for systems with more unequal-mass ratio. We also observe evidence of misalignment of spins relative to the orbital angular momentum. Published by the American Physical Society 2023

THE SECOND <i>FERMI</i> LARGE AREA TELESCOPE CATALOG OF GAMMA-RAY PULSARS
A. A. Abdo, M. Ajello, A. Allafort, L. Baldini +4 more
2013· The Astrophysical Journal Supplement Series840doi:10.1088/0067-0049/208/2/17

This catalog summarizes 117 high-confidence ≥0.1 GeV gamma-ray pulsar detections using three years of data acquired by the Large Area Telescope (LAT) on the Fermi satellite. Half are neutron stars discovered using LAT data through periodicity searches in gamma-ray and radio data around LAT unassociated source positions. The 117 pulsars are evenly divided into three groups: millisecond pulsars, young radio-loud pulsars, and young radio-quiet pulsars. We characterize the pulse profiles and energy spectra and derive luminosities when distance information exists. Spectral analysis of the off-peak phase intervals indicates probable pulsar wind nebula emission for four pulsars, and off-peak magnetospheric emission for several young and millisecond pulsars. We compare the gamma-ray properties with those in the radio, optical, and X-ray bands. We provide flux limits for pulsars with no observed gamma-ray emission, highlighting a small number of gamma-faint, radio-loud pulsars. The large, varied gamma-ray pulsar sample constrains emission models. Fermi's selection biases complement those of radio surveys, enhancing comparisons with predicted population distributions. © 2013. The American Astronomical Society. All rights reserved..

The Japanese space gravitational wave antenna: DECIGO
Seiji Kawamura, Masaki Ando, Naoki Seto, Shuichi Sato +4 more
2011· Classical and Quantum Gravity792doi:10.1088/0264-9381/28/9/094011

The objectives of the DECi-hertz Interferometer Gravitational Wave Observatory (DECIGO) are to open a new window of observation for gravitational wave astronomy and to obtain insight into significant areas of science, such as verifying and characterizing inflation, determining the thermal history of the universe, characterizing dark energy, describing the formation mechanism of supermassive black holes in the center of galaxies, testing alternative theories of gravity, seeking black hole dark matter, understanding the physics of neutron stars and searching for planets around double neutron stars. DECIGO consists of four clusters of spacecraft in heliocentric orbits; each cluster employs three drag-free spacecraft, 1000 km apart from each other, whose relative displacements are measured by three pairs of differential Fabry–Perot Michelson interferometers. Two milestone missions, DECIGO pathfinder and Pre-DECIGO, will be launched to demonstrate required technologies and possibly to detect gravitational waves.

Primordial black holes—perspectives in gravitational wave astronomy
Misao Sasaki, Teruaki Suyama, Takahiro Tanaka, Shuichiro Yokoyama
2018· Classical and Quantum Gravity784doi:10.1088/1361-6382/aaa7b4

Abstract This article reviews current understanding of primordial black holes (PBHs), with particular focus on those massive examples ( <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" overflow="scroll"> <mml:mstyle displaystyle="false"> <mml:mo>≳</mml:mo> </mml:mstyle> </mml:math> <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" overflow="scroll"> <mml:mstyle displaystyle="false"> <mml:msup> <mml:mn>10</mml:mn> <mml:mrow> <mml:mn>15</mml:mn> </mml:mrow> </mml:msup> <mml:mtext> </mml:mtext> <mml:mrow> <mml:mi mathvariant="normal">g</mml:mi> </mml:mrow> </mml:mstyle> </mml:math> ) which remain at the present epoch, not having evaporated through Hawking radiation. With the detection of gravitational waves by LIGO, we have gained a completely novel observational tool to search for PBHs, complementary to those using electromagnetic waves. Taking the perspective that gravitational-wave astronomy will make significant progress in the coming decades, the purpose of this article is to give a comprehensive review covering a wide range of topics on PBHs. After discussing PBH formation, as well as several inflation models leading to PBH production, we summarize various existing and future observational constraints. We then present topics on formation of PBH binaries, gravitational waves from PBH binaries, and various observational tests of PBHs using gravitational waves.

Observation of Gravitational Waves from Two Neutron Star-Black Hole Coalescences
R. Abbott, T. D. Abbott, S. Abraham, F. Acernese +4 more
2021· Institutional Repository University of Antwerp (University of Antwerp)649doi:10.15488/11385

We report the observation of gravitational waves from two compact binary coalescences in LIGO's and Virgo's third observing run with properties consistent with neutron star-black hole (NSBH) binaries. The two events are named GW200105_162426 and GW200115_042309, abbreviated as GW200105 and GW200115; the first was observed by LIGO Livingston and Virgo and the second by all three LIGO-Virgo detectors. The source of GW200105 has component masses, whereas the source of GW200115 has component masses and (all measurements quoted at the 90% credible level). The probability that the secondary's mass is below the maximal mass of a neutron star is 89%-96% and 87%-98%, respectively, for GW200105 and GW200115, with the ranges arising from different astrophysical assumptions. The source luminosity distances are and, respectively. The magnitude of the primary spin of GW200105 is less than 0.23 at the 90% credible level, and its orientation is unconstrained. For GW200115, the primary spin has a negative spin projection onto the orbital angular momentum at 88% probability. We are unable to constrain the spin or tidal deformation of the secondary component for either event. We infer an NSBH merger rate density of when assuming that GW200105 and GW200115 are representative of the NSBH population or under the assumption of a broader distribution of component masses. © 2021. The Author(s). Published by the American Astronomical Society.

Hayabusa2 arrives at the carbonaceous asteroid 162173 Ryugu—A spinning top–shaped rubble pile
Sei‐ichiro Watanabe, Masatoshi Hirabayashi, Naru Hirata, N. Hirata +4 more
2019· Science621doi:10.1126/science.aav8032

Hayabusa2 at the asteroid Ryugu Asteroids fall to Earth in the form of meteorites, but these provide little information about their origins. The Japanese mission Hayabusa2 is designed to collect samples directly from the surface of an asteroid and return them to Earth for laboratory analysis. Three papers in this issue describe the Hayabusa2 team's study of the near-Earth carbonaceous asteroid 162173 Ryugu, at which the spacecraft arrived in June 2018 (see the Perspective by Wurm). Watanabe et al. measured the asteroid's mass, shape, and density, showing that it is a “rubble pile” of loose rocks, formed into a spinning-top shape during a prior period of rapid spin. They also identified suitable landing sites for sample collection. Kitazato et al. used near-infrared spectroscopy to find ubiquitous hydrated minerals on the surface and compared Ryugu with known types of carbonaceous meteorite. Sugita et al. describe Ryugu's geological features and surface colors and combined results from all three papers to constrain the asteroid's formation process. Ryugu probably formed by reaccumulation of rubble ejected by impact from a larger asteroid. These results provide necessary context to understand the samples collected by Hayabusa2, which are expected to arrive on Earth in December 2020. Science , this issue p. 268 , p. 272 , p. 252 ; see also p. 230

PINK1 autophosphorylation upon membrane potential dissipation is essential for Parkin recruitment to damaged mitochondria
Kei Okatsu, Toshihiko Oka, Masahiro Iguchi, Kenji Imamura +4 more
2012· Nature Communications591doi:10.1038/ncomms2016

Dysfunction of PINK1, a mitochondrial Ser/Thr kinase, causes familial Parkinson's disease (PD). Recent studies have revealed that PINK1 is rapidly degraded in healthy mitochondria but accumulates on the membrane potential (ΔΨm)-deficient mitochondria, where it recruits another familial PD gene product, Parkin, to ubiquitylate the damaged mitochondria. Despite extensive study, the mechanism underlying the homeostatic control of PINK1 remains unknown. Here we report that PINK1 is autophosphorylated following a decrease in ΔΨm and that most disease-relevant mutations hinder this event. Mass spectrometric and mutational analyses demonstrate that PINK1 autophosphorylation occurs at Ser228 and Ser402, residues that are structurally clustered together. Importantly, Ala mutation of these sites abolishes autophosphorylation of PINK1 and inhibits Parkin recruitment onto depolarized mitochondria, whereas Asp (phosphorylation-mimic) mutation promotes mitochondrial localization of Parkin even though autophosphorylation was still compromised. We propose that autophosphorylation of Ser228 and Ser402 in PINK1 is essential for efficient mitochondrial localization of Parkin. The kinase PINK1 is mutated in Parkinson's disease and accumulates in defective mitochondria, where it recruits Parkin. Here, PINK1 is shown to be autophosphorylated and this is required for the localization of PINK1 to mitochondria with a reduced membrane potential, and for the recruitment of Parkin.

Energy Loss and Flow of Heavy Quarks in<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline"><mml:mi>Au</mml:mi><mml:mo>+</mml:mo><mml:mi>Au</mml:mi></mml:math>Collisions at<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline"><mml:msqrt><mml:msub><mml:mi>s</mml:mi><mml:mi>NN</mml:mi></mml:msub></mml:msqrt><mml:mo>=</mml:mo><mml:mn>200</mml:mn><mml:mtext> </mml:mtext><mml:mtext> </mml:mtext><mml:mi>GeV</mml:mi></mml:math>
A. Adare, S. Afanasiev, C. Aidala, N. N. Ajitanand +4 more
2007· Physical Review Letters588doi:10.1103/physrevlett.98.172301

The PHENIX experiment at the BNL Relativistic Heavy Ion Collider (RHIC) has measured electrons with $0.3&lt;{p}_{T}&lt;9\text{ }\text{ }\mathrm{GeV}/c$ at midrapidity ($|y|&lt;0.35$) from heavy-flavor (charm and bottom) decays in $\mathrm{Au}+\mathrm{Au}$ collisions at $\sqrt{{s}_{\mathrm{NN}}}=200\text{ }\text{ }\mathrm{GeV}$. The nuclear modification factor ${R}_{\mathrm{AA}}$ relative to $p+p$ collisions shows a strong suppression in central $\mathrm{Au}+\mathrm{Au}$ collisions, indicating substantial energy loss of heavy quarks in the medium produced at RHIC energies. A large azimuthal anisotropy ${v}_{2}$ with respect to the reaction plane is observed for $0.5&lt;{p}_{T}&lt;5\text{ }\text{ }\mathrm{GeV}/c$ indicating substantial heavy-flavor elliptic flow. Both ${R}_{\mathrm{AA}}$ and ${v}_{2}$ show a ${p}_{T}$ dependence different from those of neutral pions. A comparison to transport models which simultaneously describe ${R}_{\mathrm{AA}}({p}_{T})$ and ${v}_{2}({p}_{T})$ suggests that the viscosity to entropy density ratio is close to the conjectured quantum lower bound, i.e., near a perfect fluid.

Engagement in language learning: A systematic review of 20 years of research methods and definitions
Phil Hiver, Ali H. Al‐Hoorie, Joseph P. Vitta, Janice Wu
2021· Language Teaching Research568doi:10.1177/13621688211001289

At the turn of the new millennium, in an article published in Language Teaching Research in 2000, Dörnyei and Kormos proposed that ‘active learner engagement is a key concern’ for all instructed language learning. Since then, language engagement research has increased exponentially. In this article, we present a systematic review of 20 years of language engagement research. To ensure robust coverage, we searched 21 major journals on second language acquisition (SLA) and applied linguistics and identified 112 reports satisfying our inclusion criteria. The results of our analysis of these reports highlighted the adoption of heterogeneous methods and conceptual frameworks in the language engagement literature, as well as indicating a need to refine the definitions and operationalizations of engagement in both quantitative and qualitative research. Based on these findings, we attempted to clarify some lingering ambiguity around fundamental definitions, and to more clearly delineate the scope and target of language engagement research. We also discuss future avenues to further advance understanding of the nature, mechanisms, and outcomes resulting from engagement in language learning.

Horndeski theory and beyond: a review
Tsutomu Kobayashi
2019· Reports on Progress in Physics548doi:10.1088/1361-6633/ab2429

This article is intended to review the recent developments in the Horndeski theory and its generalization, which provide us with a systematic understanding of scalar-tensor theories of gravity as well as a powerful tool to explore astrophysics and cosmology beyond general relativity. This review covers the generalized Galileons, (the rediscovery of) the Horndeski theory, cosmological perturbations in the Horndeski theory, cosmology with a violation of the null energy condition, degenerate higher-order scalar-tensor theories and their status after GW170817, the Vainshtein screening mechanism in the Horndeski theory and beyond, and hairy black hole solutions.

A Diarylethene Cocrystal that Converts Light into Mechanical Work
Masakazu Morimoto, Masahiro Irie
2010· Journal of the American Chemical Society501doi:10.1021/ja105356w

The photomechancial effect of a rectangular plate two-component cocrystal composed of a photochromic diarylethene derivative, 1,2-bis(2-methyl-5-(1-naphthyl)-3-thienyl)perfluorocyclopentene (1o), and perfluoronaphthalene (FN) has been examined. The crystal of 1o·FN with the size of 1-5 mm in length exhibits reversible bending motion upon alternate irradiation with ultraviolet (UV) and visible light. The reversible bending could be repeated over 250 times. In situ X-ray crystallographic analysis revealed that the deformation of the crystal is due to the elongation of the b-axis of the unit cell, which corresponds to the long axis of the plate crystal, induced by the shape change of component diarylethene molecules upon photocyclization. The bending motion was observed even at 4.7 K, and dynamic measurement of the bending proved that the anisotropic expansion of the crystal takes place in the microsecond time scale at the low temperature. Molecular crystal cantilevers made of 1o·FN can lift metal balls, the weight of which is 200-600 times heavier than the weight of the crystal, upon UV irradiation. The maximum stress generated by UV irradiation was estimated to be 44 MPa, which is 100 times larger than that of muscles (∼0.3 MPa) and comparable to that of piezoelectric crystals, such as lead zirconate titanate (PZT) (∼50 MPa).

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A. Adare, S. Afanasiev, C. Aidala, N. N. Ajitanand +4 more
2007· Physical Review Letters467doi:10.1103/physrevlett.98.232301

The PHENIX experiment at the BNL Relativistic Heavy Ion Collider (RHIC)has measured $J/\ensuremath{\psi}$ production for rapidities $\ensuremath{-}2.2&lt;y&lt;2.2$ in $\mathrm{Au}+\mathrm{Au}$ collisions at $\sqrt{{s}_{NN}}=200\text{ }\text{ }\mathrm{GeV}$. The $J/\ensuremath{\psi}$ invariant yield and nuclear modification factor ${R}_{AA}$ as a function of centrality,transverse momentum, and rapidity are reported. A suppression of $J/\ensuremath{\psi}$ relative to binary collision scaling of proton-protonreaction yields is observed. Models which describe the lower energy $J/\ensuremath{\psi}$ data at the CERN Super Proton Synchrotron invoking only $J/\ensuremath{\psi}$ destruction based on the local medium density predicta significantly larger suppression at RHIC and more suppression at midrapiditythan at forward rapidity. Both trends are contradicted by our data.