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University of Hradec Králové

UniversityHradec Králové, Czechia

Research output, citation impact, and the most-cited recent papers from University of Hradec Králové (Czechia). Aggregated across the NobleBlocks index of 300M+ scholarly works.

Total works
11.3K
Citations
307.4K
h-index
175
i10-index
6.3K
Also known as
University of Hradec KrálovéUniverzita Hradec Králové

Top-cited papers from University of Hradec Králové

Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)
Daniel J. Klionsky, Kotb Abdelmohsen, Akihisa Abe, Md. Joynal Abedin +4 more
2016· Autophagy6.0Kdoi:10.1080/15548627.2015.1100356

AUTORES: Daniel J Klionsky1745,1749*, Kotb Abdelmohsen840, Akihisa Abe1237, Md Joynal Abedin1762, Hagai Abeliovich425,
\nAbraham Acevedo Arozena789, Hiroaki Adachi1800, Christopher M Adams1669, Peter D Adams57, Khosrow Adeli1981,
\nPeter J Adhihetty1625, Sharon G Adler700, Galila Agam67, Rajesh Agarwal1587, Manish K Aghi1537, Maria Agnello1826,
\nPatrizia Agostinis664, Patricia V Aguilar1960, Julio Aguirre-Ghiso784,786, Edoardo M Airoldi89,422, Slimane Ait-Si-Ali1376,
\nTakahiko Akematsu2010, Emmanuel T Akporiaye1097, Mohamed Al-Rubeai1394, Guillermo M Albaiceta1294,
\nChris Albanese363, Diego Albani561, Matthew L Albert517, Jesus Aldudo128, Hana Alg€ul1164, Mehrdad Alirezaei1198,
\nIraide Alloza642,888, Alexandru Almasan206, Maylin Almonte-Beceril524, Emad S Alnemri1212, Covadonga Alonso544,
\nNihal Altan-Bonnet848, Dario C Altieri1205, Silvia Alvarez1497, Lydia Alvarez-Erviti1395, Sandro Alves107,
\nGiuseppina Amadoro860, Atsuo Amano930, Consuelo Amantini1554, Santiago Ambrosio1458, Ivano Amelio756,
\nAmal O Amer918, Mohamed Amessou2089, Angelika Amon726, Zhenyi An1538, Frank A Anania291, Stig U Andersen6,
\nUsha P Andley2079, Catherine K Andreadi1690, Nathalie Andrieu-Abadie502, Alberto Anel2027, David K Ann58,
\nShailendra Anoopkumar-Dukie388, Manuela Antonioli832,858, Hiroshi Aoki1791, Nadezda Apostolova2007,
\nSaveria Aquila1500, Katia Aquilano1876, Koichi Araki292, Eli Arama2098, Agustin Aranda456, Jun Araya591,
\nAlexandre Arcaro1472, Esperanza Arias26, Hirokazu Arimoto1225, Aileen R Ariosa1749, Jane L Armstrong1930,
\nThierry Arnould1773, Ivica Arsov2120, Katsuhiko Asanuma675, Valerie Askanas1924, Eric Asselin1867, Ryuichiro Atarashi794,
\nSally S Atherton369, Julie D Atkin713, Laura D Attardi1131, Patrick Auberger1787, Georg Auburger379, Laure Aurelian1727,
\nRiccardo Autelli1992, Laura Avagliano1029,1755, Maria Laura Avantaggiati364, Limor Avrahami1166, Suresh Awale1986,
\nNeelam Azad404, Tiziana Bachetti568, Jonathan M Backer28, Dong-Hun Bae1933, Jae-sung Bae677, Ok-Nam Bae409,
\nSoo Han Bae2117, Eric H Baehrecke1729, Seung-Hoon Baek17, Stephen Baghdiguian1368,
\nAgnieszka Bagniewska-Zadworna2, Hua Bai90, Jie Bai667, Xue-Yuan Bai1133, Yannick Bailly884,
\nKithiganahalli Narayanaswamy Balaji473, Walter Balduini2002, Andrea Ballabio316, Rena Balzan1711, Rajkumar Banerjee239,
\nG abor B anhegyi1052, Haijun Bao2109, Benoit Barbeau1363, Maria D Barrachina2007, Esther Barreiro467, Bonnie Bartel997,
\nAlberto Bartolom e222, Diane C Bassham550, Maria Teresa Bassi1046, Robert C Bast Jr1273, Alakananda Basu1798,
\nMaria Teresa Batista1578, Henri Batoko1336, Maurizio Battino970, Kyle Bauckman2085, Bradley L Baumgarner1909,
\nK Ulrich Bayer1594, Rupert Beale1553, Jean-Fran¸cois Beaulieu1360, George R. Beck Jr48,294, Christoph Becker336,
\nJ David Beckham1595, Pierre-Andr e B edard749, Patrick J Bednarski301, Thomas J Begley1135, Christian Behl1419,
\nChristian Behrends757, Georg MN Behrens406, Kevin E Behrns1627, Eloy Bejarano26, Amine Belaid490,
\nFrancesca Belleudi1041, Giovanni B enard497, Guy Berchem706, Daniele Bergamaschi983, Matteo Bergami1401,
\nBen Berkhout1441, Laura Berliocchi714, Am elie Bernard1749, Monique Bernard1354, Francesca Bernassola1880,
\nAnne Bertolotti791, Amanda S Bess272, S ebastien Besteiro1351, Saverio Bettuzzi1828, Savita Bhalla913,
\nShalmoli Bhattacharyya973, Sujit K Bhutia838, Caroline Biagosch1159, Michele Wolfe Bianchi520,1378,1381,
\nMartine Biard-Piechaczyk210, Viktor Billes298, Claudia Bincoletto1314, Baris Bingol350, Sara W Bird1128, Marc Bitoun1112,
\nIvana Bjedov1258, Craig Blackstone843, Lionel Blanc1183, Guillermo A Blanco1496, Heidi Kiil Blomhoff1812,
\nEmilio Boada-Romero1297, Stefan B€ockler1464, Marianne Boes1423, Kathleen Boesze-Battaglia1835, Lawrence H Boise286,287,
\nAlessandra Bolino2063, Andrea Boman693, Paolo Bonaldo1823, Matteo Bordi897, J€urgen Bosch608, Luis M Botana1308,
\nJoelle Botti1375, German Bou1405, Marina Bouch e1038, Marion Bouchecareilh1331, Marie-Jos ee Boucher1901,
\nMichael E Boulton481, Sebastien G Bouret1926, Patricia Boya133, Micha€el Boyer-Guittaut1345, Peter V Bozhkov1141,
\nNathan Brady374, Vania MM Braga469, Claudio Brancolini1997, Gerhard H Braus353, Jos e M Bravo-San Pedro299,393,508,1374,
\nLisa A Brennan322, Emery H Bresnick2022, Patrick Brest490, Dave Bridges1939, Marie-Agn es Bringer124, Marisa Brini1822,
\nGlauber C Brito1311, Bertha Brodin631, Paul S Brookes1872, Eric J Brown352, Karen Brown1690, Hal E Broxmeyer480,
\nAlain Bruhat486,1339, Patricia Chakur Brum1893, John H Brumell446, Nicola Brunetti-Pierri315,1171,
\nRobert J Bryson-Richardson781, Shilpa Buch1777, Alastair M Buchan1819, Hikmet Budak1022, Dmitry V Bulavin118,505,1789,
\nScott J Bultman1792, Geert Bultynck665, Vladimir Bumbasirevic1470, Yan Burelle1356, Robert E Burke216,217,
\nMargit Burmeister1750, Peter B€utikofer1473, Laura Caberlotto1987, Ken Cadwell896, Monika Cahova112, Dongsheng Cai24,
\nJingjing Cai2099, Qian Cai1018, Sara Calatayud2007, Nadine Camougrand1343, Michelangelo Campanella1700,
\nGrant R Campbell1525, Matthew Campbell1249, Silvia Campello556,1876, Robin Candau1769, Isabella Caniggia1983,
\nLavinia Cantoni560, Lizhi Cao116, Allan B Caplan1656, Michele Caraglia1051, Claudio Cardinali1043, Sandra Morais Cardoso1579, Jennifer S Carew208, Laura A Carleton874, Cathleen R Carlin101, Silvia Carloni2002,
\nSven R Carlsson1267, Didac Carmona-Gutierrez1643, Leticia AM Carneiro312, Oliana Carnevali971, Serena Carra1318,
\nAlice Carrier120, Bernadette Carroll900, Caty Casas1324, Josefina Casas1116, Giuliana Cassinelli324, Perrine Castets1462,
\nSusana Castro-Obregon214, Gabriella Cavallini1841, Isabella Ceccherini568, Francesco Cecconi253,555,1884,
\nArthur I Cederbaum459, Valent ın Ce~na199,1281, Simone Cenci1323,2064, Claudia Cerella444, Davide Cervia1996,
\nSilvia Cetrullo1478, Hassan Chaachouay2028, Han-Jung Chae187, Andrei S Chagin634, Chee-Yin Chai626,628,
\nGopal Chakrabarti1502, Georgios Chamilos1601, Edmond YW Chan1142, Matthew TV Chan181, Dhyan Chandra1003,
\nPallavi Chandra548, Chih-Peng Chang818, Raymond Chuen-Chung Chang1653, Ta Yuan Chang345, John C Chatham1434,
\nSaurabh Chatterjee1910, Santosh Chauhan527, Yongsheng Che62, Michael E Cheetham1263, Rajkumar Cheluvappa1783,
\nChun-Jung Chen1153, Gang Chen598,1676, Guang-Chao Chen9, Guoqiang Chen1078, Hongzhuan Chen1077, Jeff W Chen1514,
\nJian-Kang Chen370,371, Min Chen249, Mingzhou Chen2104, Peiwen Chen1823, Qi Chen1674, Quan Chen172,
\nShang-Der Chen138, Si Chen325, Steve S-L Chen10, Wei Chen2125, Wei-Jung Chen829, Wen Qiang Chen979, Wenli Chen1113,
\nXiangmei Chen1133, Yau-Hung Chen1157, Ye-Guang Chen1250, Yin Chen1447, Yingyu Chen953,955, Yongshun Chen2135,
\nYu-Jen Chen712, Yue-Qin Chen1145, Yujie Chen1208, Zhen Chen339, Zhong Chen2123, Alan Cheng1702,
\nChristopher HK Cheng184, Hua Cheng1728, Heesun Cheong814, Sara Cherry1836, Jason Chesney1703,
\nChun Hei Antonio Cheung817, Eric Chevet1359, Hsiang Cheng Chi140, Sung-Gil Chi656, Fulvio Chiacchiera308,
\nHui-Ling Chiang958, Roberto Chiarelli1826, Mario Chiariello235,567,577, Marcello Chieppa835, Lih-Shen Chin290,
\nMario Chiong1285, Gigi NC Chiu878, Dong-Hyung Cho676, Ssang-Goo Cho650, William C Cho982, Yong-Yeon Cho105,
\nYoung-Seok Cho1064, Augustine MK Choi2095, Eui-Ju Choi656, Eun-Kyoung Choi387,400,685, Jayoung Choi1563,
\nMary E Choi2093, Seung-Il Choi2116, Tsui-Fen Chou412, Salem Chouaib395, Divaker Choubey1574, Vinay Choubey1936,
\nKuan-Chih Chow822, Kamal Chowdhury730, Charleen T Chu1856, Tsung-Hsien Chuang827, Taehoon Chun657,
\nHyewon Chung652, Taijoon Chung978, Yuen-Li Chung1194, Yong-Joon Chwae18, Valentina Cianfanelli254,
\nRoberto Ciarcia1775, Iwona A Ciechomska886, Maria Rosa Ciriolo1876, Mara Cirone1042, Sofie Claerhout1694,
\nMichael J Clague1698, Joan Cl aria1457, Peter GH Clarke1687, Robert Clarke361, Emilio Clementi1045,1398, C edric Cleyrat1781,
\nMiriam Cnop1366, Eliana M Coccia574, Tiziana Cocco1459, Patrice Codogno1375, J€orn Coers271, Ezra EW Cohen1533,
\nDavid Colecchia235,567,577, Luisa Coletto25, N uria S Coll123, Emma Colucci-Guyon516, Sergio Comincini1829,
\nMaria Condello578, Katherine L Cook2073, Graham H Coombs1929, Cynthia D Cooper2076, J Mark Cooper1395,
\nIsabelle Coppens601, Maria Tiziana Corasaniti1387, Marco Corazzari485,1884, Ramon Corbalan1566,
\nElisabeth Corcelle-Termeau251, Mario D Cordero1899, Cristina Corral-Ramos1289, Olga Corti507,1109, Andrea Cossarizza1767,
\nPaola Costelli1993, Safia Costes1518, Susan L Cotman721, Ana Coto-Montes946, Sandra Cottet566,1688, Eduardo Couve1301,
\nLori R Covey1015, L Ashley Cowart762, Jeffery S Cox1536, Fraser P Coxon1427, Carolyn B Coyne1846, Mark S Cragg1919,
\nRolf J Craven1679, Tiziana Crepaldi1995, Jose L Crespo1300, Alfredo Criollo1285, Valeria Crippa558, Maria Teresa Cruz1576,
\nAna Maria Cuervo26, Jose M Cuezva1277, Taixing Cui1907, Pedro R Cutillas987, Mark J Czaja27, Maria F Czyzyk-Krzeska1572,
\nRuben K Dagda2068, Uta Dahmen1404, Chunsun Dai800, Wenjie Dai1187, Yun Dai2059, Kevin N Dalby1940,
\nLuisa Dalla Valle1822, Guillaume Dalmasso1340, Marcello D’Amelio557, Markus Damme188, Arlette Darfeuille-Michaud1340,
\nCatherine Dargemont950, Victor M Darley-Usmar1433, Srinivasan Dasarathy205, Biplab Dasgupta202, Srikanta Dash1254,
\nCrispin R Dass242, Hazel Marie Davey8, Lester M Davids1560, David D avila227, Roger J Davis1731, Ted M Dawson604,
\nValina L Dawson606, Paula Daza1898, Jackie de Belleroche470, Paul de Figueiredo1180,1182,
\nRegina Celia Bressan Queiroz de Figueiredo135, Jos e de la Fuente1023, Luisa De Martino1775,
\nAntonella De Matteis1171, Guido RY De Meyer1443, Angelo De Milito631, Mauro De Santi2002,

Reactive oxygen species, toxicity, oxidative stress, and antioxidants: chronic diseases and aging
Klaudia Jomová, Renáta Raptová, Suliman Yousef Alomar, Saleh Alwasel +3 more
2023· Archives of Toxicology2.2Kdoi:10.1007/s00204-023-03562-9

A physiological level of oxygen/nitrogen free radicals and non-radical reactive species (collectively known as ROS/RNS) is termed oxidative eustress or "good stress" and is characterized by low to mild levels of oxidants involved in the regulation of various biochemical transformations such as carboxylation, hydroxylation, peroxidation, or modulation of signal transduction pathways such as Nuclear factor-κB (NF-κB), Mitogen-activated protein kinase (MAPK) cascade, phosphoinositide-3-kinase, nuclear factor erythroid 2-related factor 2 (Nrf2) and other processes. Increased levels of ROS/RNS, generated from both endogenous (mitochondria, NADPH oxidases) and/or exogenous sources (radiation, certain drugs, foods, cigarette smoking, pollution) result in a harmful condition termed oxidative stress ("bad stress"). Although it is widely accepted, that many chronic diseases are multifactorial in origin, they share oxidative stress as a common denominator. Here we review the importance of oxidative stress and the mechanisms through which oxidative stress contributes to the pathological states of an organism. Attention is focused on the chemistry of ROS and RNS (e.g. superoxide radical, hydrogen peroxide, hydroxyl radicals, peroxyl radicals, nitric oxide, peroxynitrite), and their role in oxidative damage of DNA, proteins, and membrane lipids. Quantitative and qualitative assessment of oxidative stress biomarkers is also discussed. Oxidative stress contributes to the pathology of cancer, cardiovascular diseases, diabetes, neurological disorders (Alzheimer's and Parkinson's diseases, Down syndrome), psychiatric diseases (depression, schizophrenia, bipolar disorder), renal disease, lung disease (chronic pulmonary obstruction, lung cancer), and aging. The concerted action of antioxidants to ameliorate the harmful effect of oxidative stress is achieved by antioxidant enzymes (Superoxide dismutases-SODs, catalase, glutathione peroxidase-GPx), and small molecular weight antioxidants (vitamins C and E, flavonoids, carotenoids, melatonin, ergothioneine, and others). Perhaps one of the most effective low molecular weight antioxidants is vitamin E, the first line of defense against the peroxidation of lipids. A promising approach appears to be the use of certain antioxidants (e.g. flavonoids), showing weak prooxidant properties that may boost cellular antioxidant systems and thus act as preventive anticancer agents. Redox metal-based enzyme mimetic compounds as potential pharmaceutical interventions and sirtuins as promising therapeutic targets for age-related diseases and anti-aging strategies are discussed.

The European guideline on management of major bleeding and coagulopathy following trauma: fifth edition
Donat R. Spahn, Bertil Bouillon, Vladimír Černý, Jacques Duranteau +4 more
2019· Critical Care1.3Kdoi:10.1186/s13054-019-2347-3

Background: Severe traumatic injury continues to present challenges to healthcare systems around the world, and post-traumatic bleeding remains a leading cause of potentially preventable death among injured patients. Now in its fifth edition, this document aims to provide guidance on the management of major bleeding and coagulopathy following traumatic injury and encourages adaptation of the guiding principles described here to individual institutional circumstances and resources.

Values and their Relationship to Environmental Concern and Conservation Behavior
P. Wesley Schultz, Valdiney Velôso Gouveia, Linda D. Cameron, Geetika Tankha +2 more
2005· Journal of Cross-Cultural Psychology1.2Kdoi:10.1177/0022022105275962

Recent research has examined the relationship between values and attitudes about environmental issues. Findings from these studies have found values of self-transcendence (positively) and self-enhancement (negatively) to predict general concern for environmental problems. Other recent findings have differentiated between environmental attitudes based on concern for self (egoistic), concern for other people (social-altruistic), and concern for plants and animals (biospheric).This article reports the results from a study of the relationship between values and environmental attitudes in six countries: Brazil, Czech Republic, Germany, India, New Zealand, and Russia. Results show strong support for the cross-cultural generalizability of the relationship between values and attitudes and on the structure of environmental concern. In addition, analyses of the relationship between values and environmental behavior show evidence for norm activation only for self-transcendence; results for self-enhancement show a consistently negative relationship.

Several lines of antioxidant defense against oxidative stress: antioxidant enzymes, nanomaterials with multiple enzyme-mimicking activities, and low-molecular-weight antioxidants
Klaudia Jomová, Suliman Yousef Alomar, Saleh Alwasel, Eugenie Nepovimová +2 more
2024· Archives of Toxicology1.1Kdoi:10.1007/s00204-024-03696-4

Abstract Reactive oxygen species (ROS) and reactive nitrogen species (RNS) are well recognized for playing a dual role, since they can be either deleterious or beneficial to biological systems. An imbalance between ROS production and elimination is termed oxidative stress, a critical factor and common denominator of many chronic diseases such as cancer, cardiovascular diseases, metabolic diseases, neurological disorders (Alzheimer’s and Parkinson’s diseases), and other disorders. To counteract the harmful effects of ROS, organisms have evolved a complex, three-line antioxidant defense system. The first-line defense mechanism is the most efficient and involves antioxidant enzymes such as superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GPx). This line of defense plays an irreplaceable role in the dismutation of superoxide radicals (O 2 ·− ) and hydrogen peroxide (H 2 O 2 ). The removal of superoxide radicals by SOD prevents the formation of the much more damaging peroxynitrite ONOO − (O 2 ·− + NO · → ONOO − ) and maintains the physiologically relevant level of nitric oxide (NO · ), an important molecule in neurotransmission, inflammation, and vasodilation. The second-line antioxidant defense pathway involves exogenous diet-derived small-molecule antioxidants. The third-line antioxidant defense is ensured by the repair or removal of oxidized proteins and other biomolecules by a variety of enzyme systems. This review briefly discusses the endogenous (mitochondria, NADPH, xanthine oxidase (XO), Fenton reaction) and exogenous (e.g., smoking, radiation, drugs, pollution) sources of ROS (superoxide radical, hydrogen peroxide, hydroxyl radical, peroxyl radical, hypochlorous acid, peroxynitrite). Attention has been given to the first-line antioxidant defense system provided by SOD, CAT, and GPx. The chemical and molecular mechanisms of antioxidant enzymes, enzyme-related diseases (cancer, cardiovascular, lung, metabolic, and neurological diseases), and the role of enzymes (e.g., GPx4) in cellular processes such as ferroptosis are discussed. Potential therapeutic applications of enzyme mimics and recent progress in metal-based (copper, iron, cobalt, molybdenum, cerium) and nonmetal (carbon)-based nanomaterials with enzyme-like activities (nanozymes) are also discussed. Moreover, attention has been given to the mechanisms of action of low-molecular-weight antioxidants (vitamin C (ascorbate), vitamin E (alpha-tocopherol), carotenoids (e.g., β-carotene, lycopene, lutein), flavonoids (e.g., quercetin, anthocyanins, epicatechin), and glutathione (GSH)), the activation of transcription factors such as Nrf2, and the protection against chronic diseases. Given that there is a discrepancy between preclinical and clinical studies, approaches that may result in greater pharmacological and clinical success of low-molecular-weight antioxidant therapies are also subject to discussion.

Essential metals in health and disease
Klaudia Jomová, Marianna Makova, Suliman Yousef Alomar, Saleh Alwasel +4 more
2022· Chemico-Biological Interactions1.0Kdoi:10.1016/j.cbi.2022.110173

In total, twenty elements appear to be essential for the correct functioning of the human body, half of which are metals and half are non-metals. Among those metals that are currently considered to be essential for normal biological functioning are four main group elements, sodium (Na), potassium (K), magnesium (Mg), and calcium (Ca), and six d-block transition metal elements, manganese (Mn), iron (Fe), cobalt (Co), copper (Cu), zinc (Zn) and molybdenum (Mo). Cells have developed various metallo-regulatory mechanisms for maintaining a necessary homeostasis of metal-ions for diverse cellular processes, most importantly in the central nervous system. Since redox active transition metals (for example Fe and Cu) may participate in electron transfer reactions, their homeostasis must be carefully controlled. The catalytic behaviour of redox metals which have escaped control, e.g. via the Fenton reaction, results in the formation of reactive hydroxyl radicals, which may cause damage to DNA, proteins and membranes. Transition metals are integral parts of the active centers of numerous enzymes (e.g. Cu,Zn-SOD, Mn-SOD, Catalase) which catalyze chemical reactions at physiologically compatible rates. Either a deficiency, or an excess of essential metals may result in various disease states arising in an organism. Some typical ailments that are characterized by a disturbed homeostasis of redox active metals include neurological disorders (Alzheimer's, Parkinson's and Huntington's disorders), mental health problems, cardiovascular diseases, cancer, and diabetes. To comprehend more deeply the mechanisms by which essential metals, acting either alone or in combination, and/or through their interaction with non-essential metals (e.g. chromium) function in biological systems will require the application of a broader, more interdisciplinary approach than has mainly been used so far. It is clear that a stronger cooperation between bioinorganic chemists and biophysicists - who have already achieved great success in understanding the structure and role of metalloenzymes in living systems - with biologists, will access new avenues of research in the systems biology of metal ions. With this in mind, the present paper reviews selected chemical and biological aspects of metal ions and their possible interactions in living systems under normal and pathological conditions.

The Significance of Reactive Oxygen Species and Antioxidant Defense System in Plants: A Concise Overview
J. Dumanović, Eugenie Nepovimová, Maja Natić, Kamil Kuča +1 more
2021· Frontiers in Plant Science968doi:10.3389/fpls.2020.552969

In plants, there is a complex and multilevel network of the antioxidative system (AOS) operating to counteract harmful reactive species (RS), the foremost important of which are reactive oxygen species (ROS), and maintain homeostasis within the cell. Specific AOSs for plant cells are, first and foremost, enzymes of the glutathione-ascorbate cycle (Asc-GSH), followed by phenolic compounds and lipophilic antioxidants like carotenoids and tocopherols. Evidence that plant cells have excellent antioxidative defense systems is their ability to survive at H 2 O 2 concentrations incompatible with animal cell life. For the survival of stressed plants, it is of particular importance that AOS cooperate and participate in redox reactions, therefore, providing better protection and regeneration of the active reduced forms. Considering that plants abound in antioxidant compounds, and humans are not predisposed to synthesize the majority of them, new fields of research have emerged. Antioxidant potential of plant compounds has been exploited for anti-aging formulations preparation, food fortification and preservation but also in designing new therapies for diseases with oxidative stress implicated in etiology.

Coati Optimization Algorithm: A new bio-inspired metaheuristic algorithm for solving optimization problems
Mohammad Dehghani, Zeinab Montazeri, Eva Trojovská, Pavel Trojovský
2022· Knowledge-Based Systems937doi:10.1016/j.knosys.2022.110011

In this paper, a new metaheuristic algorithm called the Coati Optimization Algorithm (COA) is introduced, which mimics coati behavior in nature. The fundamental idea of COA is the simulation of the two natural behaviors of coatis: (i) their behavior when attacking and hunting iguanas and (ii) their escape from predators. The implementation steps of COA are described and mathematically modeled in two phases of exploration and exploitation. COA performance is evaluated on fifty-one objective functions, including twenty-nine functions from the IEEE CEC-2017 test suite and twenty-two real-world applications from the IEEE CEC-2011 test suite. COA’s results are compared to those of eleven well-known metaheuristic algorithms. The simulation results indicate that COA has an evident superiority over the compared algorithms by balancing exploration in global search and exploitation in local search, and is far more competitive. To assess the COA’s effectiveness in real-world applications, the proposed approach is implemented on the IEEE CEC-2011 test functions and four practical optimization problems, which the simulation results indicate the high capability of COA in dealing with these types of optimization problems.

Pelican Optimization Algorithm: A Novel Nature-Inspired Algorithm for Engineering Applications
Pavel Trojovský, Mohammad Dehghani
2022· Sensors842doi:10.3390/s22030855

Optimization is an important and fundamental challenge to solve optimization problems in different scientific disciplines. In this paper, a new stochastic nature-inspired optimization algorithm called Pelican Optimization Algorithm (POA) is introduced. The main idea in designing the proposed POA is simulation of the natural behavior of pelicans during hunting. In POA, search agents are pelicans that search for food sources. The mathematical model of the POA is presented for use in solving optimization issues. The performance of POA is evaluated on twenty-three objective functions of different unimodal and multimodal types. The optimization results of unimodal functions show the high exploitation ability of POA to approach the optimal solution while the optimization results of multimodal functions indicate the high ability of POA exploration to find the main optimal area of the search space. Moreover, four engineering design issues are employed for estimating the efficacy of the POA in optimizing real-world applications. The findings of POA are compared with eight well-known metaheuristic algorithms to assess its competence in optimization. The simulation results and their analysis show that POA has a better and more competitive performance via striking a proportional balance between exploration and exploitation compared to eight competitor algorithms in providing optimal solutions for optimization problems.

Branched-chain amino acids in health and disease: metabolism, alterations in blood plasma, and as supplements
Milan Holeček
2018· Nutrition & Metabolism728doi:10.1186/s12986-018-0271-1

Branched-chain amino acids (BCAAs; valine, leucine, and isoleucine) are essential amino acids with protein anabolic properties, which have been studied in a number of muscle wasting disorders for more than 50 years. However, until today, there is no consensus regarding their therapeutic effectiveness. In the article is demonstrated that the crucial roles in BCAA metabolism play: (i) skeletal muscle as the initial site of BCAA catabolism accompanied with the release of alanine and glutamine to the blood; (ii) activity of branched-chain keto acid dehydrogenase (BCKD); and (iii) amination of branched-chain keto acids (BCKAs) to BCAAs. Enhanced consumption of BCAA for ammonia detoxification to glutamine in muscles is the cause of decreased BCAA levels in liver cirrhosis and urea cycle disorders. Increased BCKD activity is responsible for enhanced oxidation of BCAA in chronic renal failure, trauma, burn, sepsis, cancer, phenylbutyrate-treated subjects, and during exercise. Decreased BCKD activity is the main cause of increased BCAA levels and BCKAs in maple syrup urine disease, and plays a role in increased BCAA levels in diabetes type 2 and obesity. Increased BCAA concentrations during brief starvation and type 1 diabetes are explained by amination of BCKAs in visceral tissues and decreased uptake of BCAA by muscles. The studies indicate beneficial effects of BCAAs and BCKAs in therapy of chronic renal failure. New therapeutic strategies should be developed to enhance effectiveness and avoid adverse effects of BCAA on ammonia production in subjects with liver cirrhosis and urea cycle disorders. Further studies are needed to elucidate the effects of BCAA supplementation in burn, trauma, sepsis, cancer and exercise. Whether increased BCAA levels only markers are or also contribute to insulin resistance should be known before the decision is taken regarding their suitability in obese subjects and patients with type 2 diabetes. It is concluded that alterations in BCAA metabolism have been found common in a number of disease states and careful studies are needed to elucidate their therapeutic effectiveness in most indications.

Consequences of chronic diseases and other limitations associated with old age – a scoping review
Petra Marešová, Ehsan Javanmardi, Sabina Baraković, Jasmina Baraković Husić +3 more
2019· BMC Public Health706doi:10.1186/s12889-019-7762-5

BACKGROUND: The phenomenon of the increasing number of ageing people in the world is arguably the most significant economic, health and social challenge that we face today. Additionally, one of the major epidemiologic trends of current times is the increase in chronic and degenerative diseases. This paper tries to deliver a more up to date overview of chronic diseases and other limitations associated with old age and provide a more detailed outlook on the research that has gone into this field. METHODS: First, challenges for seniors, including chronic diseases and other limitations associated with old age, are specified. Second, a review of seniors' needs and concerns is performed. Finally, solutions that can improve seniors' quality of life are discussed. Publications obtained from the following databases are used in this scoping review: Web of Science, PubMed, and Science Direct. Four independent reviewers screened the identified records and selected relevant publications published from 2010 to 2017. A total of 1916 publications were selected. In all, 52 papers were selected based on abstract content. For further processing, 21 full papers were screened." RESULTS: The results indicate disabilities as a major problem associated with seniors' activities of daily living dependence. We founded seven categories of different conditions - psychological problems, difficulties in mobility, poor cognitive function, falls and incidents, wounds and injuries, undernutrition, and communication problems. In order to minimize ageing consequences, some areas require more attention, such as education and training; technological tools; government support and welfare systems; early diagnosis of undernutrition, cognitive impairment, and other diseases; communication solutions; mobility solutions; and social contributions. CONCLUSIONS: This scoping review supports the view on chronic diseases in old age as a complex issue. To prevent the consequences of chronic diseases and other limitations associated with old age related problems demands multicomponent interventions. Early recognition of problems leading to disability and activities of daily living (ADL) dependence should be one of essential components of such interventions.

Heavy metals: toxicity and human health effects
Klaudia Jomová, Suliman Yousef Alomar, Eugenie Nepovimová, Kamil Kuča +1 more
2024· Archives of Toxicology696doi:10.1007/s00204-024-03903-2

Abstract Heavy metals are naturally occurring components of the Earth’s crust and persistent environmental pollutants. Human exposure to heavy metals occurs via various pathways, including inhalation of air/dust particles, ingesting contaminated water or soil, or through the food chain. Their bioaccumulation may lead to diverse toxic effects affecting different body tissues and organ systems. The toxicity of heavy metals depends on the properties of the given metal, dose, route, duration of exposure (acute or chronic), and extent of bioaccumulation. The detrimental impacts of heavy metals on human health are largely linked to their capacity to interfere with antioxidant defense mechanisms, primarily through their interaction with intracellular glutathione (GSH) or sulfhydryl groups (R-SH) of antioxidant enzymes such as superoxide dismutase (SOD), catalase, glutathione peroxidase (GPx), glutathione reductase (GR), and other enzyme systems. Although arsenic (As) is believed to bind directly to critical thiols, alternative hydrogen peroxide production processes have also been postulated. Heavy metals are known to interfere with signaling pathways and affect a variety of cellular processes, including cell growth, proliferation, survival, metabolism, and apoptosis. For example, cadmium can affect the BLC-2 family of proteins involved in mitochondrial death via the overexpression of antiapoptotic Bcl-2 and the suppression of proapoptotic (BAX, BAK) mechanisms, thus increasing the resistance of various cells to undergo malignant transformation. Nuclear factor erythroid 2-related factor 2 (Nrf2) is an important regulator of antioxidant enzymes, the level of oxidative stress, and cellular resistance to oxidants and has been shown to act as a double-edged sword in response to arsenic-induced oxidative stress. Another mechanism of significant health threats and heavy metal (e.g., Pb) toxicity involves the substitution of essential metals (e.g., calcium (Ca), copper (Cu), and iron (Fe)) with structurally similar heavy metals (e.g., cadmium (Cd) and lead (Pb)) in the metal-binding sites of proteins. Displaced essential redox metals (copper, iron, manganese) from their natural metal-binding sites can catalyze the decomposition of hydrogen peroxide via the Fenton reaction and generate damaging ROS such as hydroxyl radicals, causing damage to lipids, proteins, and DNA. Conversely, some heavy metals, such as cadmium, can suppress the synthesis of nitric oxide radical (NO · ), manifested by altered vasorelaxation and, consequently, blood pressure regulation. Pb-induced oxidative stress has been shown to be indirectly responsible for the depletion of nitric oxide due to its interaction with superoxide radical (O 2 ·− ), resulting in the formation of a potent biological oxidant, peroxynitrite (ONOO − ). This review comprehensively discusses the mechanisms of heavy metal toxicity and their health effects. Aluminum (Al), cadmium (Cd), arsenic (As), mercury (Hg), lead (Pb), and chromium (Cr) and their roles in the development of gastrointestinal, pulmonary, kidney, reproductive, neurodegenerative (Alzheimer’s and Parkinson’s diseases), cardiovascular, and cancer (e.g. renal, lung, skin, stomach) diseases are discussed. A short account is devoted to the detoxification of heavy metals by chelation via the use of ethylenediaminetetraacetic acid ( EDTA), dimercaprol (BAL), 2,3-dimercaptosuccinic acid (DMSA), 2,3-dimercapto-1-propane sulfonic acid (DMPS), and penicillamine chelators.

Northern Goshawk Optimization: A New Swarm-Based Algorithm for Solving Optimization Problems
Mohammad Dehghani, Štěpán Hubálovský, Pavel Trojovský
2021· IEEE Access551doi:10.1109/access.2021.3133286

Optimization algorithms are one of the effective stochastic methods in solving optimization problems. In this paper, a new swarm-based algorithm called Northern Goshawk Optimization (NGO) algorithm is presented that simulates the behavior of northern goshawk during prey hunting. This hunting strategy includes two phases of prey identification and the tail and chase process. The various steps of the proposed NGO algorithm are described and then its mathematical modeling is presented for use in solving optimization problems. The ability of NGO to solve optimization problems is evaluated on sixty-eight different objective functions. To analyze the quality of the results, the proposed NGO algorithm is compared with eight well-known algorithms, particle swarm optimization, genetic algorithm, teaching-learning based optimization, gravitational search algorithm, grey wolf optimizer, whale optimization algorithm, tunicate swarm algorithm, and marine predators algorithm. In addition, for further analysis, the proposed algorithm is also employed to solve four engineering design problems. The results of simulations and experiments show that the proposed NGO algorithm, by creating a proper balance between exploration and exploitation, has an effective performance in solving optimization problems and is much more competitive than similar algorithms.

Osprey optimization algorithm: A new bio-inspired metaheuristic algorithm for solving engineering optimization problems
Mohammad Dehghani, Pavel Trojovský
2023· Frontiers in Mechanical Engineering519doi:10.3389/fmech.2022.1126450

This paper introduces a new metaheuristic algorithm named the Osprey Optimization Algorithm (OOA), which imitates the behavior of osprey in nature. The fundamental inspiration of OOA is the strategy of ospreys when hunting fish from the seas. In this hunting strategy, the osprey hunts the prey after detecting its position, then carries it to a suitable position to eat it. The proposed approach of OOA in two phases of exploration and exploitation is mathematically modeled based on the simulation of the natural behavior of ospreys during the hunting process. The performance of OOA has been evaluated in the optimization of twenty-nine standard benchmark functions from the CEC 2017 test suite. Furthermore, the performance of OOA is compared with the performance of twelve well-known metaheuristic algorithms. The simulation results show that the proposed OOA has provided superior performance compared to competitor algorithms by maintaining the balance between exploration and exploitation. In addition, the implementation of OOA on twenty-two real-world constrained optimization problems from the CEC 2011 test suite shows the high capability of the proposed approach in optimizing real-world applications.

Zebra Optimization Algorithm: A New Bio-Inspired Optimization Algorithm for Solving Optimization Algorithm
Eva Trojovská, Mohammad Dehghani, Pavel Trojovský
2022· IEEE Access494doi:10.1109/access.2022.3172789

In this paper, a new bio-inspired metaheuristic algorithm called Zebra Optimization Algorithm (ZOA) is developed; its fundamental inspiration is the behavior of zebras in nature. ZOA simulates the foraging behavior of zebras and their defense strategy against predators’ attacks. The ZOA steps are described and then mathematically modeled. ZOA performance in optimization is evaluated on sixty-eight benchmark functions, including unimodal, high-dimensional multimodal, fixed-dimensional multimodal, CEC2015, and CEC2017. The results obtained from ZOA are compared with the performance of nine well-known algorithms. The simulation results show that ZOA can solve optimization problems by creating a suitable balance between exploration and exploitation and has a superior performance compared to nine competitor algorithms. ZOA’s ability to solve real-world problems has been tested on four engineering design problems, namely, tension/compression spring, welded beam, speed reducer, and pressure vessel. The optimization results show that ZOA is an effective optimizer in determining the values of the design variables of these problems compared to the nine competitor algorithms.

Comprehensive review of energy storage systems technologies, objectives, challenges, and future trends
Dina A. Elalfy, Eid Gouda, Mohamed F. Kotb, Vladimír Bureš +1 more
2024· Energy Strategy Reviews477doi:10.1016/j.esr.2024.101482

Energy storage is one of the hot points of research in electrical power engineering as it is essential in power systems. It can improve power system stability, shorten energy generation environmental influence, enhance system efficiency, and also raise renewable energy source penetrations. This paper presents a comprehensive review of the most popular energy storage systems including electrical energy storage systems, electrochemical energy storage systems, mechanical energy storage systems, thermal energy storage systems, and chemical energy storage systems. More than 350 recognized published papers are handled to achieve this goal, and only 272 selected papers are introduced in this work. A comparison between each form of energy storage systems based on capacity, lifetime, capital cost, strength, weakness, and use in renewable energy systems is presented in a tabular form. Selected studies concerned with each type of energy storage system have been discussed considering challenges, energy storage devices, limitations, contribution, and the objective of each study. The integration between hybrid energy storage systems is also presented taking into account the most popular types. Hybrid energy storage system challenges and solutions introduced by published research are summarized and analyzed. A selection criteria for energy storage systems is presented to support the decision-makers in selecting the most appropriate energy storage device for their application. For enormous scale power and highly energetic storage applications, such as bulk energy, auxiliary, and transmission infrastructure services, pumped hydro storage and compressed air energy storage are currently suitable. Battery, flywheel energy storage, super capacitor, and superconducting magnetic energy storage are technically feasible for use in distribution networks. With an energy density of 620 kWh/m3, Li-ion batteries appear to be highly capable technologies for enhanced energy storage implementation in the built environment. Nonetheless, lead-acid batteries continue to offer the finest balance between price and performance because Li-ion batteries are still somewhat costly. The applications of energy storage systems have been reviewed in the last section of this paper including general applications, energy utility applications, renewable energy utilization, buildings and communities, and transportation. Finally, recent developments in energy storage systems and some associated research avenues have been discussed. Academics and engineers interested in energy storage strategies might refer to this review.

Insect Antimicrobial Peptides, a Mini Review
Qinghua Wu, Jiří Patočka, Kamil Kuča
2018· Toxins474doi:10.3390/toxins10110461

Antimicrobial peptides (AMPs) are crucial effectors of the innate immune system. They provide the first line of defense against a variety of pathogens. AMPs display synergistic effects with conventional antibiotics, and thus present the potential for combined therapies. Insects are extremely resistant to bacterial infections. Insect AMPs are cationic and comprise less than 100 amino acids. These insect peptides exhibit an antimicrobial effect by disrupting the microbial membrane and do not easily allow microbes to develop drug resistance. Currently, membrane mechanisms underlying the antimicrobial effects of AMPs are proposed by different modes: the barrel-stave mode, toroidal-pore, carpet, and disordered toroidal-pore are the typical modes. Positive charge quantity, hydrophobic property and the secondary structure of the peptide are important for the antibacterial activity of AMPs. At present, several structural families of AMPs from insects are known (defensins, cecropins, drosocins, attacins, diptericins, ponericins, metchnikowins, and melittin), but new AMPs are frequently discovered. We reviewed the biological effects of the major insect AMPs. This review will provide further information that facilitates the study of insect AMPs and shed some light on novel microbicides.

Histidine in Health and Disease: Metabolism, Physiological Importance, and Use as a Supplement
Milan Holeček
2020· Nutrients463doi:10.3390/nu12030848

L-histidine (HIS) is an essential amino acid with unique roles in proton buffering, metal ion chelation, scavenging of reactive oxygen and nitrogen species, erythropoiesis, and the histaminergic system. Several HIS-rich proteins (e.g., haemoproteins, HIS-rich glycoproteins, histatins, HIS-rich calcium-binding protein, and filaggrin), HIS-containing dipeptides (particularly carnosine), and methyl- and sulphur-containing derivatives of HIS (3-methylhistidine, 1-methylhistidine, and ergothioneine) have specific functions. The unique chemical properties and physiological functions are the basis of the theoretical rationale to suggest HIS supplementation in a wide range of conditions. Several decades of experience have confirmed the effectiveness of HIS as a component of solutions used for organ preservation and myocardial protection in cardiac surgery. Further studies are needed to elucidate the effects of HIS supplementation on neurological disorders, atopic dermatitis, metabolic syndrome, diabetes, uraemic anaemia, ulcers, inflammatory bowel diseases, malignancies, and muscle performance during strenuous exercise. Signs of toxicity, mutagenic activity, and allergic reactions or peptic ulcers have not been reported, although HIS is a histamine precursor. Of concern should be findings of hepatic enlargement and increases in ammonia and glutamine and of decrease in branched-chain amino acids (valine, leucine, and isoleucine) in blood plasma indicating that HIS supplementation is inappropriate in patients with liver disease.

Ochratoxin A: 50 Years of Research
František Malíř, Vladimír Ostrý, Annie Pfohl‐Leszkowicz, Jan Malir +1 more
2016· Toxins458doi:10.3390/toxins8070191

Since ochratoxin A (OTA) was discovered, it has been ubiquitous as a natural contaminant of moldy food and feed. The multiple toxic effects of OTA are a real threat for human beings and animal health. For example, OTA can cause porcine nephropathy but can also damage poultries. Humans exposed to OTA can develop (notably by inhalation in the development of acute renal failure within 24 h) a range of chronic disorders such as upper urothelial carcinoma. OTA plays the main role in the pathogenesis of some renal diseases including Balkan endemic nephropathy, kidney tumors occurring in certain endemic regions of the Balkan Peninsula, and chronic interstitial nephropathy occurring in Northern African countries and likely in other parts of the world. OTA leads to DNA adduct formation, which is known for its genotoxicity and carcinogenicity. The present article discusses how renal carcinogenicity and nephrotoxicity cause both oxidative stress and direct genotoxicity. Careful analyses of the data show that OTA carcinogenic effects are due to combined direct and indirect mechanisms (e.g., genotoxicity, oxidative stress, epigenetic factors). Altogether this provides strong evidence that OTA carcinogenicity can also occur in humans.

Future Trends and Current State of Smart City Concepts: A Survey
Ayca Kirimtat, Ondřej Krejcar, Attila Kertész, M. Fatih Taşgetiren
2020· IEEE Access448doi:10.1109/access.2020.2992441

Intelligent systems are wanting for cities to cope with limited spaces and resources across the world. As a result, smart cities emerged mainly as a result of highly innovative ICT industries and markets, and additionally, they have started to use novel solutions taking advantage of the Internet of Things (IoT), big data and cloud computing technologies to establish a profound connection between each component and layer of a city. Several key technologies congregate to build a working smart city considering human requirements. Even though the smart city concept is an advanced solution for today's cities, recently, more living spaces should be discovered, and the concept of a smart city could be moved to these alternative living spaces, namely floating cities. The concept of a floating city emerged as a novel solution due to rising sea levels and land scarcity in order to provide alternative living spaces for humanity. In this article, our main research question is to raise awareness on the current state of smart city concepts across the world by understanding the key future trends, including floating cities, by motivating researchers and scientists through new IoT technologies and applications. Therefore, we present a survey of smart city initiatives and analyze their key concepts and different data management techniques. We performed a detailed literature survey and review by applying a complex literature matrix including terms, like smart people, smart economy, smart governance, smart mobility, smart environment, and smart living. We also discuss multiple perspectives of smart floating cities in detail. With the proposed approach, recent advances and practical future opportunities for smart cities can be revealed.