PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

Suyama, Mikita; Torrents, David; Bork, Peer

doi:10.1093/nar/gkl315

Public

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

Published in Nucleic Acids Research • Jul 1, 2006

Authors:

Mikita Suyama

David Torrents

Peer Bork

Abstract

PAL2NAL is a web server that constructs a multiple codon alignment from the corresponding aligned protein sequences. Such codon alignments can be used to evaluate the type and rate of nucleotide substitutions in coding DNA for a wide range of evolutionary analyses, such as the identification of leve...

Subject

Biology

Stop codon

Genetics

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