Gateways to the FANTOM5 promoter level mammalian expression atlas

Lizio, Marina; Harshbarger, Jayson; Shimoji, Hisashi; Severin, Jessica; Kasukawa, Takeya; Sahin, Serkan; Abugessaisa, Imad; Fukuda, Shiro; Hori, Fumi; Ishikawa-Kato, Sachi; Mungall, Chris; Arner, Erik; Kenneth Baillie, J.; Bertin, Nicolas; Bono, Hidemasa; de Hoon, Michiel; D. Diehl, Alexander; Dimont, Emmanuel; C. Freeman, Tom; Fujieda, Kaori; Hide, Winston; Kaliyaperumal, Rajaram; Katayama, Toshiaki; Lassmann, Timo; F. Meehan, Terrence; Nishikata, Koro; Ono, Hiromasa; Rehli, Michael; Sandelin, Albin; Schultes, Erik; A.C. ’t Hoen, Peter; Tatum, Zuotian; Thompson, Mark; Toyoda, Tetsuro; Wright, Derek; O. Daub, Carsten; Itoh, Masayoshi; Carninci, Piero; Hayashizaki, Yoshihide; R. R. Forrest, Alistair; Kawaji, Hideya

doi:10.1186/s13059-014-0560-6

Public

Gateways to the FANTOM5 promoter level mammalian expression atlas

Published in Genome biology • Jan 5, 2015

Authors:

Marina Lizio

Jayson Harshbarger

Hisashi Shimoji

Abstract

The FANTOM5 project investigates transcription initiation activities in more than 1,000 human and mouse primary cells, cell lines and tissues using CAGE. Based on manual curation of sample information and development of an ontology for sample classification, we assemble the resulting data into a cen...

Subject

Biology

Genome Biology

Human genetics

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