iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide composition

Lin, Hao; Deng, En-Ze; Ding, Hui; Chen, Wei; Chou, Kuo‐Chen

doi:10.1093/nar/gku1019

Public

iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide composition

Published in Nucleic Acids Research • Oct 31, 2014

Authors:

Hao Lin

En-Ze Deng

Hui Ding

Abstract

The σ(54) promoters are unique in prokaryotic genome and responsible for transcripting carbon and nitrogen-related genes. With the avalanche of genome sequences generated in the postgenomic age, it is highly desired to develop automated methods for rapidly and effectively identifying the σ(54) promo...

Subject

Biology

Promoter

Computational biology

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