An automated genotyping system for analysis of HIV-1 and other microbial sequences

de Oliveira, T.; Deforche, Koen; Cassol, S; Salminen, Mika; Paraskevis, Dimitrios; J. Seebregts, Christopher; Snoeck, J.; J. van Rensburg, Elizabeth; M. J. Wensing, Annemarie; van de Vijver, David; A. Boucher, Charles; Camacho, Ricardo; Vandamme, Anne‐Mieke

doi:10.1093/bioinformatics/bti607

Public

An automated genotyping system for analysis of HIV-1 and other microbial sequences

Published in Computer applications in the biosciences • Aug 2, 2005

Authors:

T. de Oliveira

Koen Deforche

S Cassol

Abstract

MOTIVATION: Genetic analysis of HIV-1 is important not only for vaccine development, but also to guide treatment strategies, track the emergence of new viral variants and ensure that diagnostic assays are contemporary and fully optimized. However, most genotyping methods are laborious and complex, a...

Subject

Subtyping

Perl

Genotyping

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