SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap

D. Johnson, Andrew; E. Handsaker, Robert; L. Pulit, Sara; M. Nizzari, Marcia; J. O’Donnell, Christopher; I. W. de Bakker, Paul

doi:10.1093/bioinformatics/btn564

Public

SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap

Published in Bioinformatics • Oct 30, 2008

Authors:

Andrew D. Johnson

Robert E. Handsaker

Sara L. Pulit

Abstract

SUMMARY: The interpretation of genome-wide association results is confounded by linkage disequilibrium between nearby alleles. We have developed a flexible bioinformatics query tool for single-nucleotide polymorphisms (SNPs) to identify and to annotate nearby SNPs in linkage disequilibrium (proxies)...

Subject

International HapMap Project

Linkage disequilibrium

Single-nucleotide polymorphism

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