HTSeq—a Python framework to work with high-throughput sequencing data

Anders, Simon; Theodor Pyl, Paul; Huber, Wolfgang

doi:10.1093/bioinformatics/btu638

Public

HTSeq—a Python framework to work with high-throughput sequencing data

Published in Bioinformatics • Sep 25, 2014

Authors:

Simon Anders

Paul Theodor Pyl

Wolfgang Huber

Abstract

MOTIVATION: A large choice of tools exists for many standard tasks in the analysis of high-throughput sequencing (HTS) data. However, once a project deviates from standard workflows, custom scripts are needed. RESULTS: We present HTSeq, a Python library to facilitate the rapid development of such sc...

Subject

Python (programming language)

Computer science

Scripting language

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