Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes

Kimura, Kouichi; Wakamatsu, Ai; Suzuki, Yutaka; Ota, Toshio; Nishikawa, Tetsuo; Yamashita, Riu; Yamamoto, Jun‐ichi; Sekine, Mitsuo; Tsuritani, Katsuki; Wakaguri, Hiroyuki; Ishii, Shizuko; Sugiyama, Tomoyasu; Saito, Kaoru; Isono, Yuko; Irie, Ryotaro; Kushida, Norihiro; Yoneyama, Takahiro; Otsuka, Rie; Kanda, Katsuhiro; Yokoi, Takahide; Kondo, Hiroshi; Wagatsuma, Masako; Murakawa, Katsuji; Ishida, Shinichi; Ishibashi, Tadashi; Takahashi-Fujii, Asako; Tanase, Tomo-o; Nagai, Keiichi; Kikuchi, Hisashi; Nakai, Kenta; Isogai, Takao; Sugano, Sumio

doi:10.1101/gr.4039406

Public

Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes

Published in Genome Research • Dec 12, 2005

Authors:

Kouichi Kimura

Ai Wakamatsu

Yutaka Suzuki

Abstract

By analyzing 1,780,295 5'-end sequences of human full-length cDNAs derived from 164 kinds of oligo-cap cDNA libraries, we identified 269,774 independent positions of transcriptional start sites (TSSs) for 14,628 human RefSeq genes. These TSSs were clustered into 30,964 clusters that were separated f...

Subject

Promoter

Biology

Alternative splicing

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