Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.

T, Itoh; T, Tanaka; RA, Barrero; C, Yamasaki; Y, Fujii; PB, Hilton; BA, Antonio; H, Aono; R, Apweiler; R, Bruskiewich; T, Bureau; F, Burr; de Oliveira A, Costa; G, Fuks; T, Habara; G, Haberer; B, Han; E, Harada; AT, Hiraki; H, Hirochika; D, Hoen; H, Hokari; S, Hosokawa; YI, Hsing; H, Ikawa; K, Ikeo; T, Imanishi; Y, Ito; P, Jaiswal; M, Kanno; Y, Kawahara; T, Kawamura; H, Kawashima; JP, Khurana; S, Kikuchi; S, Komatsu; KO, Koyanagi; H, Kubooka; D, Lieberherr; YC, Lin; D, Lonsdale; T, Matsumoto; A, Matsuya; WR, McCombie; J, Messing; A, Miyao; N, Mulder; Y, Nagamura; J, Nam; N, Namiki; H, Numa; S, Nurimoto; C, O'Donovan; H, Ohyanagi; T, Okido; S, Oota; N, Osato; N, Osato; LE, Palmer; F, Quetier; S, Raghuvanshi; N, Saichi; H, Sakai; Y, Sakai; K, Sakata; T, Sakurai; F, Sato; Y, Sato; H, Schoof; M, Seki; M, Shibata; Y, Shimizu; K, Shinozaki; Y, Shinso; NK, Singh; B, Smith-White; J, Takeda; M, Tanino; T, Tatusova; S, Thongjuea; F, Todokoro; M, Tsugane; AK, Tyagi; A, Vanavichit; A, Wang; RA, Wing; K, Yamaguchi; M, Yamamoto; N, Yamamoto; Y, Yu; H, Zhang; Q, Zhao; K, Higo; B, Burr; T, Gojobori; T, Sasaki

doi:10.1101/gr.5509507

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Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.

Shared by NobleBlocks on Jan 8, 2007 • 12:00 AM UTC

Authors:

Itoh T

Tanaka T

Barrero RA

Abstract

We present here the annotation of the complete genome of rice Oryza sativa L. ssp. japonica cultivar Nipponbare. All functional annotations for proteins and non-protein-coding RNA (npRNA) candidates were manually curated. Functions were identified or inferred in 19,969 (70%) of the proteins, and 131...

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