DrosophilaMuller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution

Leung, Wilson; Shaffer, C.; K Reed, Laura; T. Smith, Sheryl; D. Barshop, William; Dirkes, William; Dothager, Matthew; C. Lee, Paul; Wong, Jeannette; D. Xiong, David; Yuan, Han; E. J. Bedard, James; F Machone, Joshua; D Patterson, Seantay; Price, Amber; A. Turner, Bryce; Robic, Srebrenka; K Luippold, Erin; R McCartha, Shannon; Walji, Tezin; A. Walker, Chelsea; Saville, Kenneth; K Abrams, Marita; Armstrong, Andrew; F. Armstrong, William; J. Bailey, Robert; R Barberi, Chelsea; Beck, Lauren; L. Blaker, Amanda; Blunden, Christopher; Brand, Jordan; J. Brock, Ethan; W Brooks, Dana; Brown, Marie; C Butzler, Sarah; M. Clark, Eric; Clark, Nicole; A Collins, Ashley; J Cotteleer, Rebecca; R Cullimore, Peterson; G Dawson, Seth; T Docking, Carter; L Dorsett, Sasha; Dougherty, Grace; A Downey, Kaitlyn; Drake, Andrew; K Earl, Erica; G Floyd, Trevor; D Forsyth, Joshua; D Foust, Jonathan; L Franchi, Spencer; Geary, James; K. Hanson, Cynthia; Harding, Taylor; B. Harris, Cameron; M Heckman, Jonathan; L Holderness, Heather; A Howey, Nicole; A Jacobs, Dontae; S. Jewell, Elizabeth; Kaisler, Maria; A Karaska, Elizabeth; Kehoe, James; C. Koaches, Hannah; Koehler, Jessica; Koenig, Dana; J Kujawski, Alexander; E Kus, Jordan; A Lammers, Jennifer; R. Leads, Rachel; C Leatherman, Emily; N. Lippert, Rachel; S Messenger, Gregory; T Morrow, Adam; Newcomb, Victoria; J Plasman, Haley; J Potocny, Stephanie; K Powers, Michelle; M Reem, Rachel; Rennhack, Jonathan; R. Reynolds, Katherine; A. Reynolds, Lyndsey; Kwon Rhee, Dong; B. Rivard, Allyson; J. Ronk, Adam; B Rooney, Meghan; S Rubin, Lainey; R. Salbert, Luke; K Saluja, Rasleen; Schauder, Taylor; R Schneiter, Allison; W Schulz, Robert; E. Smith, Karl; J. Spencer, Sarah; R Swanson, Bryant; A Tache, Melissa; A Tewilliager, Ashley; K. Tilot, Amanda; VanEck, Eve; M Villerot, Matthew; B Vylonis, Megan; T. Watson, David; A Wurzler, Juliana; M Wysocki, Lauren; Yalamanchili, Monica; A. Zaborowicz, Matthew; A. Emerson, Julia; Martínez-Ortiz, Carlos; J Deuschle, Frederic; A DiLorenzo, Lauren; L Goeller, Katie; R Macchi, Christopher; E Muller, Sarah; D Pasierb, Brittany; E Sable, Joseph; M Tucci, Jessica; Tynon, Marykathryn; A. Dunbar, David; H Beken, Levent; C Conturso, Alaina; L Danner, Benjamin; A DeMichele, Gabriella; A Gonzales, Justin; S Hammond, Maureen; Kelley, Colleen; A Kelly, Elisabeth; Kulich, Danielle; M. Mageeney, Catherine; L McCabe, Nikie; M. Newman, Alyssa; A Spaeder, Lindsay; A Tumminello, Richard; Revie, Dennis; M Benson, Jonathon; C Cristostomo, Michael; A DaSilva, Paolo; S. Harker, Katherine; N Jarrell, Jenifer; A. Jiménez, Luis; M Katz, Brandon; R. Kennedy, William; S Kolibas, Kimberly; T LeBlanc, Mark; T. Nguyen, Trung; S Nicolas, Daniel; D Patao, Melissa; M Patao, Shane; J Rupley, Bryan; J Sessions, Bridget; Weaver, Jennifer; Goodman, Anya; L Alvendia, Erica; M Baldassari, Shana; Brown, Ashley; O Chase, Ian; Chen, Maida; Chiang, Scott; B Cromwell, Avery; F. Custer, Ashley; DiTommaso, Tia; El-Adaimi, Jad; C. Goscinski, Nora; Grove, Ryan; A. Gutierrez, N.; Harnoto, Raechel; A Hedeen, Heather; L Hong, Emily; Hopkins, Barbara; F Huerta, Vilma; Khoshabian, Colin; M LaForge, Kristin; T. Lee, Cassidy; M. Lewis, Benjamin; Lydon, Anniken; Maniaci, Brian; Mitchell, Ryan; V. Morlock, Elaine; Morris, William; Naik, Priyanka; Olson, Nicole; M. Osterloh, Jeannette; Perez, Marcos; D Presley, Jonathan; J Randazzo, Matt; Regan, Melanie; Rossi, Franca; A. Smith, Melanie; A Soliterman, Eugenia; J Sparks, Ciani; L Tran, Danny; Wan, Tiffany; A Welker, Anne; C. S. Wong, J.; Sreenivasan, Aparna; Youngblom, Jim; K. Adams, Andrew; Alldredge, Justin; Bryant, Ashley; Carranza, David; Cifelli, Alyssa; Coulson, Kevin; Debow, Calise; Delacruz, Noelle; H. Emerson, Charlene; Farrar, Cassandra; Foret, Don; Garibay, Edgar; Gooch, John; Heslop, Michelle; Kaur, Sukhjit; Khan, Ambreen; Kim, Van; Lamb, Travis; Lindbeck, Peter; Chase Lucas, G; Macias, Elizabeth; Martiniuc, Daniela; Mayorga, Lissett; Medina, Joseph; Membreno, Nelson; Messiah, Shadi; Neufeld, Lacey; Francisco Nguyen, San; Nichols, Zachary; Odisho, George; Peterson, Daymon; Rodela, Laura; Rodriguez, Priscilla; Rodríguez‐Fanjul, Vanessa; Ruiz, Jorge; Sherrill, Will; Silva, Valeria; Sparks, Jeri; Statton, Geeta; T. Townsend, Ashley; Celeste Valdez, Isabel; Waters, Mary; Westphal, Kyle; Winkler, Stacey; Zumkehr, Joannee; J. DeJong, Randall; J. Hoogewerf, Arlene; M. Ackerman, Cheri; Armistead, Isaac; Baatenburg, Lara; J. Borr, Matthew; K Brouwer, Lindsay; J. Burkhart, Brandon; T. Bushhouse, Kelsey; Cesko, Lejla; Y Y Choi, Tiffany; Cohen, Heather; M Damsteegt, Amanda; M Darusz, Jess; M Dauphin, Cory; P. 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Crowley, Samuel; S Doty, Jennifer; A. Dow, Brian; Edwards, Curtis; D Elder, Darcie; P. Fanning, John; M Janssen, Bridget; K Lambright, Anthony; E Lane, Curtiss; B Limle, Austin; Mazur, Tammy; R McCracken, Marly; M McDonough, Alexa; D Melton, Amy; J Minnick, Phillip; E Musick, Adam; Henry Newhart, William; W Noynaert, Joseph; J Ogden, Bradley; W Sandusky, Michael; M. Schmuecker, Samantha; Shipman, Anna; Smith, Anna; M. Thomsen, Kristen; R Unzicker, Matthew; Vernon, William; W Winn, Wesley; Woyski, Dustin; Fan Zhu, Xiao; Du, Chunguang; M. Ament, Caitlin; Aso, Soham; Simone Bisogno, Laura; Caronna, Jason; Fefelova, Nadezhda; Lopez, Lenin; Malkowitz, Lorraine; Marra, Jonathan; Menillo, Daniella; Obiorah, Ifeanyi; Nyabeta Onsarigo, Eric; Primus, Shekerah; Soos, Mahdi; Tare, Archana; Zidan, Ameer; J. Jones, Christopher; Aronhalt, Todd; M Bellush, James; Burke, Christa; DeFazio, Steve; R Does, Benjamin; D. Johnson, Todd; Keysock, Nicholas; H. Knudsen, Nelson; Messler, James; Myirski, Kevin; Lea Rekai, Jade; Michael Rempe, Ryan; S Salgado, Michael; Stagaard, Erica; R Starcher, Justin; W Waggoner, Andrew; K Yemelyanova, Anastasia; T. Hark, Amy; Bertolet, Anne; E. Kuschner, Cyrus; Parry, Kesley; Quach, Michael; Shantzer, Lindsey; Shaw, Mary; Ann Smith, Mary; Glenn, Omolara; Mason, Portia; Williams, Charlotte; Catherine Silver Key, S.; C P Henry, Tyneshia; G Johnson, Ashlee; X White, Jackie; Haberman, Adam; Asinof, Sam; Drumm, Kelly; Freeburg, Trip; Safa, Nadia; T. Schultz, Darrin; Shevin, Yakov; Svoronos, Petros; D. Vuong, Tam; Wellinghoff, Jules; L. Mays Hoopes, Laura; Chau, Kim; Ward, Alyssa; Gloria C. Regisford, E.; Augustine, LaJerald; Davis-Reyes, Brionna; Echendu, Vivienne; Hales, Jasmine; Ibarra, Sharon; Steven Johnson, L.; Ovu, Steven; M. Braverman, John; J Bahr, Thomas; M. Caesar, Nicole; Campana, Christopher; W Cassidy, Daniel; A. Cognetti, Peter; D English, Johnathan; C. Fadus, Matthew; Fick, Cameron; J. 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doi:10.1534/g3.114.015966

Public

DrosophilaMuller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution

Published in G3 Genes Genomes Genetics • Mar 4, 2015

Authors:

Wilson Leung

C. Shaffer

Laura K Reed

Abstract

The Muller F element (4.2 Mb, ~80 protein-coding genes) is an unusual autosome of Drosophila melanogaster; it is mostly heterochromatic with a low recombination rate. To investigate how these properties impact the evolution of repeats and genes, we manually improved the sequence and annotated the ge...

Subject

Euchromatin

Biology

Transposable element

Research Assistant

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