Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE.

E, Valen; G, Pascarella; A, Chalk; N, Maeda; M, Kojima; C, Kawazu; M, Murata; H, Nishiyori; D, Lazarevic; D, Motti; TT, Marstrand; MH, Tang; X, Zhao; A, Krogh; O, Winther; T, Arakawa; J, Kawai; C, Wells; C, Daub; M, Harbers; Y, Hayashizaki; S, Gustincich; A, Sandelin; P, Carninci

doi:10.1101/gr.084541.108

Public

Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE.

Shared by NobleBlocks on Dec 11, 2008 • 12:00 AM UTC

Authors:

Valen E

Pascarella G

Chalk A

Abstract

Finding and characterizing mRNAs, their transcription start sites (TSS), and their associated promoters is a major focus in post-genome biology. Mammalian cells have at least 5-10 magnitudes more TSS than previously believed, and deeper sequencing is necessary to detect all active promoters in a giv...

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