RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads

Novák, Petr; Neumann, Pavel; Pech, Jiří; Steinhaisl, Jaroslav; Macas, Jir̆ı́

doi:10.1093/bioinformatics/btt054

Public

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads

Published in Bioinformatics • Feb 1, 2013

Authors:

Petr Novák

Pavel Neumann

Jiří Pech

Abstract

Abstract Motivation: Repetitive DNA makes up large portions of plant and animal nuclear genomes, yet it remains the least-characterized genome component in most species studied so far. Although the recent availability of high-throughput sequencing data provides necessary resources for in-depth inves...

Subject

Computer science

Genome

Source code

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