ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization

Yu, Guangchuang; Wang, Li-Gen; He, Qing‐Yu

doi:10.1093/bioinformatics/btv145

Public

ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization

Published in Bioinformatics • Mar 11, 2015

Authors:

Guangchuang Yu

Li-Gen Wang

Qing‐Yu He

Abstract

UNLABELLED: ChIPseeker is an R package for annotating ChIP-seq data analysis. It supports annotating ChIP peaks and provides functions to visualize ChIP peaks coverage over chromosomes and profiles of peaks binding to TSS regions. Comparison of ChIP peak profiles and annotation are also supported. M...

Subject

Bioconductor

Computer science

Annotation

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