Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi

Fortin, Jean-Philippe; J. Triche, Timothy; D Hansen, Kasper

doi:10.1093/bioinformatics/btw691

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Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi

Shared by NobleBlocks on Nov 28, 2016 • 12:00 AM UTC

Authors:

Jean-Philippe Fortin

Timothy J. Triche

Kasper D Hansen

Abstract

Abstract Summary The minfi package is widely used for analyzing Illumina DNA methylation array data. Here we describe modifications to the minfi package required to support the HumanMethylationEPIC (‘EPIC’) array from Illumina. We discuss methods for the joint analysis and normalization of data from...

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