JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

Khan, Aziz; Fornés, Oriol; Stigliani, Arnaud; Gheorghe, Marius; A. Castro-Mondragón, Jaime; van der Lee, Robin; Bessy, Adrien; Chèneby, Jeanne; R. Kulkarni, Shubhada; Tan, Ge; Baranas̆ić, Damir; J. Arenillas, David; Sandelin, Albin; Vandepoele, Klaas; Lenhard, Boris; Ballester, Benoît; W. Wasserman, Wyeth; Parcy, François; Mathelier, Anthony

doi:10.1093/nar/gkx1126

Public

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

Published in Nucleic Acids Research • Oct 27, 2017

Authors:

Aziz Khan

Oriol Fornés

Arnaud Stigliani

Abstract

JASPAR (http://jaspar.genereg.net) is an open-access database of curated, non-redundant transcription factor (TF)-binding profiles stored as position frequency matrices (PFMs) and TF flexible models (TFFMs) for TFs across multiple species in six taxonomic groups. In the 2018 release of JASPAR, the C...

Subject

Biology

Bioconductor

Genome

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