VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium

Bagaev, Dmitry; M. A. Vroomans, Renske; Samir, Jerome; Stervbo, Ulrik; Rius, Cristina; Dolton, Garry; Greenshields‐Watson, Alexander; Attaf, Meriem; S. Egorov, Evgeny; V. Zvyagin, Ivan; Babel, Nina; K. Cole, David; Godkin, Andrew; K. Sewell, Andrew; Keşmir, Can; M. Chudakov, Dmitriy; Luciani, Fabio; Shugay, Mikhail

doi:10.1093/nar/gkz874

Public

VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium

Published in Nucleic Acids Research • Sep 30, 2019

Authors:

Dmitry Bagaev

Renske M. A. Vroomans

Jerome Samir

Abstract

Here, we report an update of the VDJdb database with a substantial increase in the number of T-cell receptor (TCR) sequences and their cognate antigens. The update further provides a new database infrastructure featuring two additional analysis modes that facilitate database querying and real-world ...

Subject

T-cell receptor

Biology

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