ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization.

B, Lee; J, Wang; L, Cai; M, Kim; S, Namburi; H, Tjong; Y, Feng; P, Wang; Z, Tang; A, Abbas; CL, Wei; Y, Ruan; Y, Ruan; S, Li

doi:10.1126/sciadv.aay2078

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ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization.

Shared by NobleBlocks on Jul 10, 2020 • 12:00 AM UTC

Authors:

Lee B

Wang J

Cai L

Abstract

ChIA-PET (chromatin interaction analysis with paired-end tags) enables genome-wide discovery of chromatin interactions involving specific protein factors, with base pair resolution. Interpretation of ChIA-PET data requires a robust analytic pipeline. Here, we introduce ChIA-PIPE, a fully automated p...

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