CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database

Alcock, Brian; Huynh, William; Chalil, Romeo; W Smith, Keaton; R. Raphenya, Amogelang; A. Wlodarski, Mateusz; Edalatmand, Arman; Petkau, Aaron; A Syed, Sohaib; K. Tsang, Kara; J.C. Baker, Sheridan; Dave, Mugdha; C. McCarthy, Madeline; M Mukiri, Karyn; A. Nasir, Jalees; Golbon, Bahar; Imtiaz, Hamna; Jiang, Xingjian; Kaur, Komal; W‐L Kwong, Megan; Cheng Liang, Zi; C Niu, Keyu; Shan, Prabakar; Y J Yang, Jasmine; L. Gray, Kristen; R Hoad, Gemma; Jia, Baofeng; Bhando, Timsy; A. Carfrae, Lindsey; A. Farha, Maya; French, Shawn; Gordzevich, Rodion; Rachwalski, Kenneth; M. Tu, Megan; Bordeleau, Emily; Dooley, Damion; Griffiths, Emma; L. Zubyk, Haley; D. Brown, Eric; Maguire, Finlay; G. Beiko, Robert; Hsiao, William; S. L. Brinkman, Fiona; Van Domselaar, Gary; G. McArthur, Andrew

doi:10.1093/nar/gkac920

Public

CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database

Published in Nucleic Acids Research • Oct 20, 2022

Authors:

Brian Alcock

William Huynh

Romeo Chalil

Abstract

The Comprehensive Antibiotic Resistance Database (CARD; card.mcmaster.ca) combines the Antibiotic Resistance Ontology (ARO) with curated AMR gene (ARG) sequences and resistance-conferring mutations to provide an informatics framework for annotation and interpretation of resistomes. As of version 3.2...

Subject

Resistome

Biology

Database

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