Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000 Salmonella Typhi genomes

E. Carey, Megan; A. Dyson, Zoe; J. Ingle, Danielle; Amir, Afreenish; Kamweli Aworh, Mabel; Anne Chattaway, Marie; Lip Chew, Ka; A. Crump, John; Feasey, Nicholas; P. Howden, Benjamin; H. Keddy, Karen; Maes, Mailis; M. Parry, Christopher; Van Puyvelde, Sandra; E. Webb, Hattie; O. Afolayan, Ayorinde; Anandan, Shalini; R. Andrews, Jason; Ashton, Philip; Basnyat, Buddha; Bavdekar, Ashish; I. Bogoch, Isaac; D. Clemens, John; E. da Silva, Kesia; De, Anuradha; de Ligt, Joep; Díaz, Paula; Dolecek, Christiane; Dutta, Shanta; Francois Watkins, Louise; O. Garrett, Denise; Godbole, Gauri; A. Gordon, Melita; R. Greenhill, Andrew; Griffin, Chelsey; Gupta, Madhu; Hendricksen, Rene; S. Heyderman, Robert; Hooda, Yogesh; Carlos Hormazábal, Juan; O. Ikhimiukor, Odion; Iqbal, Junaid; John Jacob, Jobin; Jenkins, Claire; Ramaiah Jinka, Dasaratha; John, Jacob; Kang, Gagandeep; Kanteh, Abdoulie; Kapil, Arti; Karkey, Abhilasha; Kariuki, Samuel; A. Kingsley, Robert; Mary Koshy, Roshine; Lauer, A.C.; M. Levine, Myron; Kadahalli Lingegowda, Ravikumar; P. Luby, Stephen; Mackenzie, Grant; Mashe, Tapfumanei; Msefula, Chisomo; Mutreja, Ankur; Nagaraj, Geetha; Nagaraj, Savitha; Nair, Satheesh; Naseri, Take; Nimarota-Brown, Susana; Njamkepo, Elisabeth; N. Okeke, Iruka; Putli Bai Perumal, Sulochana; J. Pollard, Andrew; Kumari Pragasam, Agila; Qadri, Firdausi; Naz Qamar, Farah; Rahman, Sadia; Rambocus, Savitra; A. Rasko, David; Ray, Pallab; M. Robins‐Browne, Roy; Rongsen‐Chandola, Temsunaro; Pierre Rutanga, Jean; K. Saha, Samir; Saha, Senjuti; Saigal, Karnika; Saiful Islam Sajib, Mohammad; C. Seidman, Jessica; Shakya, Jivan; Shamanna, Varun; Shastri, Jayanthi; Shrestha, Rajeev; Sia, Sonia; J. Sikorski, Michael; Singh, Ashita; M. Smith, Anthony; A. Tagg, Kaitlin; Tamrakar, Dipesh; Mohammad Tanmoy, Arif; Thomas, Maria; Thomas, M.; Thomsen, Robert; R. Thomson, Nicholas; Tupua, Siaosi; Vaidya, Krista; Valcanis, Mary; Veeraraghavan, Balaji; Weill, François‐Xavier; Wright, Jackie; Dougan, Gordon; Argimón, Silvia; A. Keane, Jacqueline; M. Aanensen, David; Baker, Stephen; E. Holt, Kathryn

doi:10.1101/2022.12.28.22283969

Public

Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000 Salmonella Typhi genomes

Published in medRxiv • Dec 30, 2022

Authors:

Megan E. Carey

Zoe A. Dyson

Danielle J. Ingle

Abstract

Abstract The Global Typhoid Genomics Consortium was established to bring together the typhoid research community to aggregate and analyse Salmonella enterica serovar Typhi (Typhi) genomic data to inform public health action. This analysis, which marks twenty-one years since the publication of the fi...

Subject

Typhoid fever

Salmonella typhi

Antibiotic resistance

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