Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage

Börner, Katy; D. Blood, Philip; C. Silverstein, Jonathan; Ruffalo, Matthew; Satija, Rahul; A. Teichmann, Sarah; Pryhuber, Gloria; Misra, Ravi; M. Purkerson, Jeffrey; Fan, Jean; W. Hickey, John; Molla, Gesmira; Xu, Chuan; Zhang, Yun; M. Weber, Griffin; Jain, Yashvardhan; Qaurooni, Danial; Kong, Yongxin; Team, HRA; Abramson, Jakub; M. Anderson, David; Ardlie, Kristin; J. Arends, Mark; J. Aronow, Bruce; Bajema, Rachel; Baldock, Richard; Barnowski, Ross; Barwinska, Daria; Bernard, Amy; Betancur, David; Bidanta, Supriya; Björklund, Frida; Bolin, Axel; Boppana, Avinash; Boulter, Luke; Browne, Kristen; Brusko, Maigan; Burger, Albert; Campbell‐Thompson, Martha; Cao-Berg, Ivan; R. Caron, Anita; Carroll, Megan; Chadwick, Chrystal; Chen, Hao; Chen, Lu; de Bono, Bernard; Deutsch, Gail; Ding, Song‐Lin; P. Donahue, Sean; M. El‐Achkar, Tarek; Eskaros, Adel; D. Falo, Louis; A. Farrow, Melissa; J. Ferkowicz, Michael; Fisher, Stephen; C. Gee, James; N. Germain, Ronald; Ginda, Michael; Ginty, Fiona; A. Gitomer, Sarah; B. Goldstone, Melanie; S. Gustilo, Katherine; S. Hagood, James; K. Halushka, Marc; Haniffa, Muzlifah; Hanna, Peter; Hardi, Josef; He, Yongqun; Honick, Brendan; Houghton, Derek; Itkin, Maxim; Jain, Sanjay; Jardine, Laura; Gordon Jiang, Z.; Ju, Yingnan; Karunamurthy, Arivarasan; L. Kelleher, Neil; J. Kendall, Timothy; Kruse, Angela; M. Laronda, Monica; C. Laurent, Louise; Laurenti, Elisa; Lee, Sujin; S. Lein, Ed; Li, Chenran; Li, Zhuoyan; Lin, Shin; Lin, Yiing; A. Lindsay, Scott; A. Longacre, Teri; Lundberg, Emma; Maier, Libby; Malhotra, Rajeev; Martinez Casals, Anna; Maria Masci, Anna; E. Mathews, Clayton; McDonough, Elizabeth; Alastair McLaughlin, James; Menon, Rajasree; Menon, Vilas; A. Miller, Jeremy; Morgan, Richard; Müller, Werner; F. Murphy, Robert; A. Musen, Mark; Nakshatri, Harikrishna; C. Nawijn, Martijn; K. Neumann, Elizabeth; J. Nigra, Debra; O’Neill, Kathleen; M. Parast, Mana; M. Patel, U.; Pei, Liming; Phatnani, Hemali; A. Phillips, Gesina; M. Pouch, Alison; C. Powers, Alvin; Puerto, Juan; Puig-Barbe, Aleix; M. Quardokus, Ellen; J. Radtke, Andrea; Rajbhandari, Presha; G. Record, Elizabeth; J. Roberts, Drucilla; J. Ropelewski, Alexander; W. Rowe, David; Ruschman, Nancy; C. Saunders, Diane; H. Scheuermann, Richard; L. Schey, Kevin; Schilling, Birgit; Schlehlein, Heidi; Schwenk, Melissa; Scibek, Robin; Seifert, Robert; Shirey, Bill; Shivkumar, Kalyanam; Siletti, Kimberly; K. Simmons, John; Singhal, Dhruv; Snyder, M; M. Spraggins, Jeffrey; Stanley, Valentina; W. Strand, Douglas; Sunshine, Joel; Surrette, Christine; Suzuki, Ayako; Rao Tata, Purushothama; Taylor, Deanne; N. Theriault, Todd; Theriault, Tracey; Easo Thomas, Jerin; Tsui, Elizabeth; Uranic, Jackie; Todd Valerius, M.; Van Valen, David; M. Vezina, Chad; S. Vlachos, Ioannis; Wang, Fusheng; Wang, Xuefei; Wasserfall, Clive; Welling, Joel; Werlein, Christopher; Winfree, Seth; Wright, Devin; Li, Yao; Zhou, Yuan; Zhang, Ted; Bueckle, Andreas; W. Herr, Bruce

doi:10.1038/s41592-024-02563-5

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Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage

Published in Nature Methods • Mar 13, 2025

Authors:

Katy Börner

Philip D. Blood

Jonathan C. Silverstein

Abstract

The Human BioMolecular Atlas Program (HuBMAP) aims to construct a 3D Human Reference Atlas (HRA) of the healthy adult body. Experts from 20+ consortia collaborate to develop a Common Coordinate Framework (CCF), knowledge graphs and tools that describe the multiscale structure of the human body (from...

Subject

Atlas (anatomy)

Computer science

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