Centro de Química y Materiales de Aragón

Nowadays, the eutectic liquids (DESs) are considered an adequate alternative to the traditional solvents. Therefore, there is an increasing interest in the study of the structure, properties and applications of these mixtures. In this paper, several NMR spectroscopic techniques have been used in order to evaluate the molecular structure of three ternary DESs, composed of choline chloride, urea or glycerol or ethylene glycol, and water. The use of routine and non-routine NMR techniques, such as 1H, 13C, correlation experiments, NOESY, ROESY, and diffusion experiments gave us some important evidences pointing to a supramolecular structure of the DES, which may be the origin of their particular behaviour. The mixture containing ethylene glycol shows the feeblest structure. In these ternary solvents, the water is found within the structure that is still retained when DESs are diluted at 10% wt.

Unusual magnetic behaviour is observed in compounds with three Cl ligands in fac -mode coordination to dysprosium, cerium and even gadolinium.

The reactivity of nitrones in cycloadditions and related reactions is revisited by introducing a topological perspective. In particular, the study of electron localization function (ELF) along a reaction pathway allows evaluating bond reorganization showing that in several cases the bonds are formed in a sequential way, the second one being formed once the first one is already formed. Both classical 1,3-dipolar cycloadditions and Mannich-type reactions revealed unexpected features often underestimated in classical mechanistic studies.

Two new polyhydroxylated nortropane analogues closely related with Calystegines have been prepared in excellent chemical yields and complete selectivity. A synthetic strategy based on consecutive nucleophilic allylation, oxidation, and intramolecular dipolar cycloaddition was developed. The formation of key intermediate cycloadducts were observed to take place through the recently confirmed thermally induced 2-aza-Cope rearrangement of nitrones.

Quantification, using an accurate analytical approach, of capsinoids and capsaicinoids was performed on three chili pepper ( Capsicum spp.) genotypes: “Chiltepı́n”, “Tampiqueño 74”, and “Bhut Jolokia” at various stages of fruit development. The accumulation of capsinoids, in all these peppers started between 10 to 20 days post-anthesis (dpa), increased and reached the highest capsinoid amount at 40 dpa, and then decreased until 60 dpa. Conversely, capsaicinoids could already be determined at 10 dpa in “Bhut Jolokia” and their accumulation pattern was different from that of the capsinoids in this genotype. The capsiate/dihydrocapsiate ratio presented a higher variation between genotypes and developmental stages than the capsaicin/dihydrocapsaicin ratio. Capsinoid ratios (4–24%) and Pun1 / pAMT genotyping were determined. These results provide information on the progress of the accumulation of capsinoids in the aforementioned pungent and superhot cultivars and could support future breeding studies toward the understanding of the factors affecting their accumulation.

Here, we present a highly efficient approach to nucleobase-containing spiro-isoxazolidines with potential biological activity starting from isatinyl/indanyl nitrones.

Ring-closing metathesis reactions of dialkenyl amines, amides and carbamates catalyzed by Ru-catalysts provide efficient approaches to six-membered nitrogen heterocyclic compounds, which are precursors of a variety of natural products and related compounds.

Quantum chemical topology analyses provide a new way of understanding the synchronicity of organic reactions.

The cycloaddition of azomethine ylide N-oxides (nitrone ylides) with aldehydes provides 3-oxazolines in a completely stereoselective manner in the presence of a catalytic amount of n-butyllithium. The process involves an initial nucleophilic attack on the aldehyde, followed by intramolecular oxygen addition to the nitrone moiety and lithium-assisted elimination of water, regenerating the catalytic species. Various Li-based catalytic systems are possible and the in situ generated water is required for continuing the catalytic cycle. The best results are observed with 20 mol % of n-butyllithium, whereas the use of stoichiometric amounts inhibit the rate of catalysis. Experimental, spectroscopic, and computational mechanistic studies have provided evidence of lithium-ion catalysis and rationalized several competing catalytic pathways.

The Leloir donors are nucleotide sugars essential for a variety of glycosyltransferases (GTs) involved in the transfer of a carbohydrate to an acceptor substrate, typically a protein or an oligosaccharide. A series of less-polar nucleotide sugar analogues derived from uridine have been prepared by replacing one phosphate unit with an alkyl chain. The methodology is based on the radical hydrophosphonylation of alkenes, which allows coupling of allyl glycosyl compounds with a phosphate unit suitable for conjugation to uridine. Two of these compounds, the GalNAc and galactose derivatives, were further tested on a model GT, such as GalNAc-T2 (an important GT widely distributed in human tissues), to probe that both compounds bound in the medium-high micromolar range. The crystal structure of GalNAc-T2 with the galactose derivative traps the enzyme in an inactive form; this suggests that compounds only containing the β-phosphate could be efficient ligands for the enzyme. Computational studies with GalNAc-T2 corroborate these findings and provide further insights into the mechanism of the catalytic cycle of this family of enzymes.

Abstract A full experimental study of the activation energy required for the hitherto unknown neutral 2‐aza‐Cope rearrangement is presented. A kinetic study of the process showed activation energies in the range of 22.91–24.06 kcal/mol, in agreement with a process operating at moderate temperature (70 °C). Calculations at B3LYP/6‐311+G(d,p) and M06‐2X/6‐311+G(d,p) levels of theory considering solvent (dimethyl sulfoxide (DMSO) and toluene) effects (PCM model) predict reaction energy barriers that are in agreement with the values obtained from 1H NMR‐based kinetic experiments. Results obtained by using enantiomerically pure substrates demonstrate that the rearrangement takes place with complete transfer of chirality, in contrast to previously described cationic processes. The effects of solvent and acid catalysis, which converts the process into the more common cationic rearrangement, have also been studied. DFT calculations also predict correctly the acceleration of the process under acid catalysis, estimating energy barriers in the range of 16.80–18.57 kcal/mol.

Liquid-Assisted Pulsed Laser Ablation (LA-PLA) is a promising top-down method to directly synthesize colloidal dispersions of nanoparticles in a eco-friendly manner. However, the role of LA-PLA synthesis parameters is not yet fully agreed. This work seeks to optimize the production of nanoscale zero-valent iron (nZVI) particles suitable for biomedical or environmental applications using nanosecond LA-PLA on iron targets with different ablation media, laser and target scanning parameters. The use of alcohols as solvents produces iron-iron oxide core-shell nanoparticles with amorphous cores, except for a small crystalline fraction corresponding to the biggest core sizes. Decreasing carbon chain length and complexity leads to a thinning of the carbonaceous material coatings and an increase of the colloidal stability and the nanoparticle productivity. Moreover, a decrease of solvent density and surface tension allows obtaining reduced sizes and polydispersity values. Among, laser and scanning parameters, the pulse accumulation per spot displayed a clear effect in boosting size and productivity. As main outcome, aqueous dispersions with suitable colloidal properties are obtained, either by transferring to water of optimized nZVI particles produced in ethanol, or by direct formation of nZVI particles and in situ coating with hydrophilic molecules in aqueous solutions of these molecules.

Abstract Homogeneous polycrystalline FexOy nanoparticles were generated by ablation of iron targets in water by nanosecond laser pulses at 532 nm. In ethanol, crystalline core‐shell Fe/FexOy structures with size medians around 20 nm were produced. The ablation of FeWxOy targets in water resulted in crystalline hollow shells and homogeneous FeWxOy nanoparticles. In contrast, amorphous core‐shell FeWxOy nanoparticles with a median size of 17 nm were produced in ethanol. The size distribution of both the FexOy and the FeWxOy particles showed a slight dependence on fluence and pulse number. This may be related to primary and secondary ablation and modification mechanisms.

Abstract High-performance thin-layer chromatography was directly combined with electrospray mass spectrometry (ESI-MS) for structural identification issues below the level of lipid classes in complex samples through a portable, automated, elution-based interface. For samples as diverse as biodiesel and human plasma, separation conditions using Automated Multiple Development were selected in each case to provide lipid classes as zones narrow enough to ensure a direct transfer of them to ESI-MS. The respective zone of interest can be selected at will. ESI+ spectra of neutral lipids and sphingolipids showed sodium adducts when recorded from the plate. By using the described technique and ion-trap technology, the respective sodium adducts were fragmented. Sodium remained as the charge of the fragment ions and, thus, was useful for their structural identification through MSn. In this way, composition profiles of each class by ESI+-MS, and further identification of individual lipids and the molecular species belonging to each of them, were obtained by MS/MS and/or high-resolution MS. Thus, mono and diacylglycerides in ESI+ and fatty acids (in ESI−) were identified as low-concentration impurities in a fatty acid methyl ester–based biodiesel sample. Likewise, molecular species of sphingomyelins and globotriaosylceramides were unequivocally identified in human plasma samples.

-pronucleophiles in the initial oxa-Michael reaction, also leading to the formation of a single stereoisomer under a dynamic kinetic resolution (DKR) process. Importantly, by using β-aryl or β-alkyl substituted α,β-unsaturated substrates as initial Michael acceptors either kinetically or thermodynamically controlled diastereoisomers were formed with high stereoselection through the careful selection of the reaction conditions. Finally, a complete experimental and computational study confirmed the initially proposed DKR process during the catalytic oxa-Michael/Michael cascade reaction and also explained the kinetic/thermodynamic pathway operating in each case.

Abstract The experimental and computational study of the mechanism of the iminium‐organocatalyzed formation of N‐hydroxypyrrolidines from nitrones, revealed up to three activation levels of the Schreiner's thiourea used as co‐catalyst, i.e: (i) formation of the iminium ion through hydroxyl anion recognition forming a stable ion pair; (ii) enolization of the nitrone through a H‐bond network and (iii) activation of the nitrone moiety towards the final ring closure. The computational model supports the mechanism and the catalytic cycle. This mechanistic rationale is supported by the lack of reactivity of preformed iminium ion with the nitrone in the absence of thiourea‐hydroxyl complex and the observed reactivity when a complex thiourea‐tetrabutylammonium hydroxide is added. magnified image

This study aims to develop a low invasive and selective laser cleaning procedure for the removal of reactive corrosion products on Cu-based artefacts without damage the substrate. In a preliminary step, laser cleaning was performed on two typologies of artificially corroded copper reference samples. The effect of the variation of laser parameters as pulse duration and output power, was thus evaluated on an oxide layer, simulating a protective patina, and a hydroxychloride layer, simulating a reactive corrosion products layer to be removed. The optimized cleaning procedure was validated on an archaeological artefact, a bronze coin. Morphological, microchemical and microstructural characterizations were performed by means of optical microscopy, confocal microscopy, field emission scanning electron microscopy, X-Ray diffraction and Raman spectroscopy, before and after laser cleaning. The experimental findings show that laser cleaning, in optimized conditions, can reduce the thickness of the hydroxychloride layers slightly affecting the oxide layers. The difference in the interaction with laser radiation of these two layers seems to be mainly related to the difference in grain size and porosity. Notwithstanding these encouraging results, in order to define the real feasibility of the laser cleaning procedure, a further validation on real artefacts is mandatory due to the variation in thickness and composition of the corrosion products formed during long-lasting uncontrolled degradation processes.

Thlaspi arvense (Pennycress) is an emerging feedstock for biofuel production because of its high seed oil content enriched in erucic acid. A transcriptomic and a lipidomic study were performed to analyze the dynamics of gene expression, glycerolipid content and acyl-group distribution during seed maturation. Genes involved in fatty acid biosynthesis were expressed at the early stages of seed maturation. Genes encoding enzymes of the Kennedy pathway like diacylglycerol acyltransferase1 (TaDGAT1), lysophosphatidic acid acyltransferase (TaLPAT) or glycerol 3-phosphate acyltransferase (TaGPAT) increased their expression with maturation, coinciding with the increase in triacylglycerol species containing 22:1. Positional analysis showed that the most abundant triacylglycerol species contained 18:2 at sn-2 position in all maturation stages, suggesting no specificity of the lysophosphatidic acid acyltransferase for very long chain fatty acids. Diacylglycerol acyltransferase2 (TaDGAT2) mRNA was more abundant at the initial maturation stages, coincident with the rapid incorporation of 22:1 to triacylglycerol, suggesting a coordination between Diacylglycerol acyltransferase enzymes for triacylglycerol biosynthesis. Genes encoding the phospholipid-diacylglycerol acyltransferase (TaPDAT1), lysophosphatidylcholine acyltransferase (TaLPCAT) or phosphatidylcholine diacylglycerolcholine phosphotransferase (TaPDCT), involved in acyl-editing or phosphatidyl-choline (PC)-derived diacylglycerol (DAG) biosynthesis showed also higher expression at the early maturation stages, coinciding with a higher proportion of triacylglycerol containing C18 fatty acids. These results suggested a higher contribution of these two pathways at the early stages of seed maturation. Lipidomic analysis of the content and acyl-group distribution of diacylglycerol and phosphatidyl-choline pools was compatible with the acyl content in triacylglycerol at the different maturation stages. Our data point to a model in which a strong temporal coordination between pathways and isoforms in each pathway, both at the expression and acyl-group incorporation, contribute to high erucic triacylglycerol accumulation in Pennycress.

Ethynylation and propargylation of chiral nonracemic polyhydroxylated cyclic nitrones with Grignard reagents are efficient methods for preparing building blocks containing an alkyne moiety to be used in copper-catalyzed azide alkyne cycloaddition click chemistry. Whereas ethynylation takes place with excellent diastereoselectivity, propargylation afforded mixtures of diastereomers in some cases. The use of (trimethylsilyl)propargyl bromide as precursor of the Grignard reagent is necessary to avoid the formation of undesired allene derivatives. DFT calculations explain, within the experimental error, the observed behavior. Cycloaddition of the obtained pyrrolidinyl alkynes with sugar azides derived from β-(1,3)-glucans provides glycomimetics suitable to be used against fungal transglycosylases.

This paper presents a new method for the fabrication of metal-like decorative layers on glazed ceramic tiles. It consists of the laser treatment of Cu thin films prepared by electron-beam evaporation at glancing angles. A thin film of discontinuous Cu nanoparticles was electron-beam-evaporated in an oblique angle configuration onto ceramic tiles and an ample palette of colors obtained by laser treatment both in air and in vacuum. Scanning electron microscopy along with UV-vis-near-IR spectroscopy and time-of-flight secondary ion mass spectrometry analysis were used to characterize the differently colored layers. On the basis of these analyses, color development has been accounted for by a simple model considering surface melting phenomena and different microstructural and chemical transformations of the outmost surface layers of the samples.